Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04609 ATGGCTTCTTCAACCAAAGAGATAGACAGAGAACTTCCACCTCTTCTCCGTGTCTACAAAGATGGAACAGTTGACCGTTTCCTAGGCTCTCCAATTGTACCACCAATCCCTCTTGATCCAGAAACAGGTGTTTCATCAAAAGACATAGTAATCTCACAAAACCCATTAATCCAAGCTCGTATTCATCTCCCAAAAATCACCAACCAAACTCAAAAACTTCCAATTTTAGTTTATTATCATGGTGGTGCTTTTTGTCTTGAATCAGCTTTCTCTTTCCTTCATCAACGTTATCTCAACATTATTGCTTCACAATCAAATGTTATTGTTGTTTCTGTTGAATATAGACTTGCACCAGAACATCCTCTTCCTGCTGCATATGATGATGGTTGGTTTTCTCTCAAATGGGTTACTTCACATTCCATTGAAAACAACAATAACATCACAAATATTGAACCTTGGTTAATCAAACATGGTGATTTTGATAGATTTTACATTGGTGGTGATACTTCAGGTGCAAATATTGCACATAATGCACTTCTTCGTGTCGGTGGTAATAACGATGTTGATTCTTTGCCTGGTGATGTGAAAATCAAAGGAGCATTACTTGCTTTTCCTTTGTTTTGGAGTTCAAAACCAGTTTTATCAGAATCTGTTGAAGGACATGAACAGAGTTCACCAATGAAAGTTTGGAATTTTGTATATCCTGATGCAGTTGGTGGAATTGATAATCCTTTGATTAATCCTTTGGCAGATGATGCACCTAGTTTGGACAAGATTGGTTGTCctaagattttgatttttgttgctGGTAAGGATGATTTAAGAGACAGAGGGATTTGGTATTATGAAGCTGTTAAGAAAAGTGGTTGGAAAGGTGAAGTGGAACTTGTTCATGTTGAAGGTGAAGAACATTGTTTTCAGATTTATCATCCTGAAACTCAGAATTCTATTGATATGGTGAATCGTATTGCTTCTTTCCTTGTTTGA 987 0.3607 MASSTKEIDRELPPLLRVYKDGTVDRFLGSPIVPPIPLDPETGVSSKDIVISQNPLIQARIHLPKITNQTQKLPILVYYHGGAFCLESAFSFLHQRYLNIIASQSNVIVVSVEYRLAPEHPLPAAYDDGWFSLKWVTSHSIENNNNITNIEPWLIKHGDFDRFYIGGDTSGANIAHNALLRVGGNNDVDSLPGDVKIKGALLAFPLFWSSKPVLSESVEGHEQSSPMKVWNFVYPDAVGGIDNPLINPLADDAPSLDKIGCPKILIFVAGKDDLRDRGIWYYEAVKKSGWKGEVELVHVEGEEHCFQIYHPETQNSIDMVNRIASFLV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04609 328 Pfam alpha/beta hydrolase fold 76 307 IPR013094 GO:0016787
Tsu01g04609 328 Gene3D alpha/beta hydrolase 12 328 IPR029058 -
Tsu01g04609 328 SUPERFAMILY alpha/beta-Hydrolases 14 327 IPR029058 -
Tsu01g04609 328 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 4 327 - -
Tsu01g04609 328 PANTHER ARYLACETAMIDE DEACETYLASE 4 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04609 Tsu-Chr1 53570660 53572183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04609 7 327 Carbohydrate Esterase AT3G48700 37.805 8.97e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04609 - K13258 gmx:100785409 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00058 05 441712 442710 Tsu01g04609 01 53570660 53572183 PCT