Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04608 ATGACTTCCACAACATCATCCACCGCCACCGATACTCCTAAACACATCATCTCCGAAATTCCTACCTATATCACTCTCTACAGCGACGGCACCGTCGATCGTCCACGACAAGCACCACTAGTCCCACCCAATCTCGACGACCCAAATATTCCAGTCTCATCCAAAGACATCATCATCTCTCAAAACCCCAATATCTCTGCTCGTCTCTATCTTCCCAAAAACTCCACCAATAAACTTCCCATCTTAGTCTTCTTCCATGGCGGTGGATTCTTCTTTGAATCAGCTTTCTCTAAACTCTACCATGAACACTTTAATGTCTTTGTTTCACAAGCAAATTCCATAGTTGTTTCTGTTGAATACagacttgctccagaacacccTCTACCTGCTTGTTATAATGATTGTTGGAATGCACTTCAATGGGTTGCTTCTAATTCTGCTGAAAACCCCATAAACCCAGAACCGTGGTTAATTAACCATGGTGATTTCAATAGAGTTTTCATCGGTGGTGATAGTGCTGGTGGTAACATAGTTCATAACATAGCTATGAGAGCTGGTTCTGAATCTTTACCAAATGATGTTAAACTATTAGGTGCTATTTTACAGCACCCTTATTTCTATAGTTCATATCCTGTTGGAGCAGAAACTGTTAAAAGTCCTGAAGAAGATTTGTGTTATATGGTTTGGAAATTTGTGTATCCATCAGCATCTGGTGGAATTGATAATCCTATGGTTAACCCCTTGGGTGTAGGGGCGCCGAGTTTGGAAGGAATTGGTTGTGATAGAATGATTGTTTGTGTTGCTGGGAAAGATGGAATTAGGGAGAGAGGGGTTTGGTATTATGAGAATGTGAAGAAGAGTGGTTGGAAAGGGAAATTGGAAttgtttgaagaaaaagatgaagatcatgtttatcatatttttcatcctGAATCTGAGAATGGTCAAAAATTGATTAAACGTTTGGCTTCTTTTCTTCATGAGTAA 987 0.3769 MTSTTSSTATDTPKHIISEIPTYITLYSDGTVDRPRQAPLVPPNLDDPNIPVSSKDIIISQNPNISARLYLPKNSTNKLPILVFFHGGGFFFESAFSKLYHEHFNVFVSQANSIVVSVEYRLAPEHPLPACYNDCWNALQWVASNSAENPINPEPWLINHGDFNRVFIGGDSAGGNIVHNIAMRAGSESLPNDVKLLGAILQHPYFYSSYPVGAETVKSPEEDLCYMVWKFVYPSASGGIDNPMVNPLGVGAPSLEGIGCDRMIVCVAGKDGIRERGVWYYENVKKSGWKGKLELFEEKDEDHVYHIFHPESENGQKLIKRLASFLHE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04608 328 Gene3D alpha/beta hydrolase 4 327 IPR029058 -
Tsu01g04608 328 Pfam alpha/beta hydrolase fold 82 306 IPR013094 GO:0016787
Tsu01g04608 328 SUPERFAMILY alpha/beta-Hydrolases 28 327 IPR029058 -
Tsu01g04608 328 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 12 327 - -
Tsu01g04608 328 PANTHER ARYLACETAMIDE DEACETYLASE 12 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04608 Tsu-Chr1 53563149 53564482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04608 26 328 Carbohydrate Esterase AT1G19190 41.613 1.06e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04608 - K13258 gmx:100795872 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04608 01 53563149 53564482 Tsu05g00058 05 441712 442710 PCT