Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04605 ATGGCTTCCACAAAACACATCATCTCTCAAATTCCTACCTATATCACTCTCTACAGCGACGGCACTGTCGATCGTCCACGACAAGCACCACTAGTTCCACCCAATCTCGACGATCCAAATATCCCAGTCTCATCCAAAGACATCATCATCTCTCAAAACCCCAATATCTCTGCTCGTCTCTACCTCCCCAAAAACCCCACAAAAAAACTACCCATCTTAGTCTTCTTCCATGGCGGTGGATTCTTCTTCGAATCAGCTTTCTCTAAACTCTACCATGAACACTTTAATGTCTTTGTTTCACAAGCAAATTCCATAGTTGTTTCTGTTGAATACagacttgctccagaacacccTCTACCTGCTTGTTATAATGATTGTTGGAATGCACTTCAATGGGTTGCTTCTAATTCTGCTGAAAACCCCATCAACCCAGAACCGTGGTTAATTAACCATGGTGATTTCAATAGAGTTTTCATTGGTGGTGACAGTGCTGGTGGTAACATAGTTCATAACATAGCTATGAGAGCTGGTTCTGAATCTTTACCAAATGATGTTAAACTATTAGGTGCTATTTTACAACATCCTTATTTCTATAGTTCATACCCTGTTGGAGCAGAAACTGTTAAATTTAAGAATTCTGAACATGATTTTTATTCTTCCGTTTGGAATTTTGTGTATCCATCAGCACCTGGTGGAATTGATAATCCTATGGTTAATCCTTTGGGTGTAGGGGCGCCAAGTTTGGAAAGAATTGGCTGTGATAGGATGATTATTTGTGTTGCTGGGAAAGATGGAATTAGGGAGAGAGGGGTTTggttcgtataa 825 0.3867 MASTKHIISQIPTYITLYSDGTVDRPRQAPLVPPNLDDPNIPVSSKDIIISQNPNISARLYLPKNPTKKLPILVFFHGGGFFFESAFSKLYHEHFNVFVSQANSIVVSVEYRLAPEHPLPACYNDCWNALQWVASNSAENPINPEPWLINHGDFNRVFIGGDSAGGNIVHNIAMRAGSESLPNDVKLLGAILQHPYFYSSYPVGAETVKFKNSEHDFYSSVWNFVYPSAPGGIDNPMVNPLGVGAPSLERIGCDRMIICVAGKDGIRERGVWFV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04605 274 Gene3D alpha/beta hydrolase 3 274 IPR029058 -
Tsu01g04605 274 PANTHER ARYLACETAMIDE DEACETYLASE 4 273 - -
Tsu01g04605 274 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 4 273 - -
Tsu01g04605 274 SUPERFAMILY alpha/beta-Hydrolases 22 273 IPR029058 -
Tsu01g04605 274 Pfam alpha/beta hydrolase fold 73 270 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04605 Tsu-Chr1 53546250 53547074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04605 17 272 Carbohydrate Esterase AT1G19190 40.840 3.21e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04605 - K13258 gmx:100795872 400.593