Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04570 ATGATTGGTTGTGGCGTCCCACTTGAGGAGTCAGATATCTCTAAGCTCCCATACTTACAAGCAATCATAAAAGAGACATTTCGGTTGCACCCACCGGTGCCATTTTTACTACCACGAAAAGCTGAGAGGAATGTCGACATAGGTGGCTACACTATCCCAAAGGACGCGCACGTGCTAGTTAATGTGTGGAATATTGGCAGAGATCCCACTATTTGGGTGAATCCAACTTTGTTCTCACCAGATAGGTTCTTGGGATCAGATATTGATGTCAAAGGCCGGAATTTTGAGCTTGCACCATTTGGTGCTGGACGACGAATATGCCCCGGCTTACAACTGGCTAATAGGATGCTGCTACTAATGTTGGGGTCACTAGTCAACTCCTTTGATTGGAAGCTTGAAGGTGACATGAAACCAGAAGATATGGATATGGATGACAAATTCGGCATTACCTTGCAAAAGGCACAACCCCTTCGAGTTGTTCCCGTAAGAATAAGCAAATAA 501 0.4491 MIGCGVPLEESDISKLPYLQAIIKETFRLHPPVPFLLPRKAERNVDIGGYTIPKDAHVLVNVWNIGRDPTIWVNPTLFSPDRFLGSDIDVKGRNFELAPFGAGRRICPGLQLANRMLLLMLGSLVNSFDWKLEGDMKPEDMDMDDKFGITLQKAQPLRVVPVRISK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04570 166 PRINTS P450 superfamily signature 21 32 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 PRINTS P450 superfamily signature 98 107 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 PRINTS P450 superfamily signature 107 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 SUPERFAMILY Cytochrome P450 6 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 100 109 IPR017972 GO:0005506|GO:0016705
Tsu01g04570 166 Gene3D Cytochrome P450 1 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 165 - -
Tsu01g04570 166 Pfam Cytochrome P450 8 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 165 - -
Tsu01g04570 166 PRINTS E-class P450 group I signature 20 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 PRINTS E-class P450 group I signature 61 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 PRINTS E-class P450 group I signature 97 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04570 166 PRINTS E-class P450 group I signature 107 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04570 Tsu-Chr1 53278563 53279063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04570 8 157 Cytochrome P450 AT1G33730 67.333 8.87e-73 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04570 - - gmx:100798291 267.314