Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04569 ATGGATCGTCTGTCCCATATTATTGCTGATCAGGTGGAGGCTCAATATTGGAAACCAATGCGCGCAGGTAGGCATGGTCCTCAAAtatctcatcttctttttgctgacgACCTTCTTTTGTTTGCAGAGGCCTCTATTGAGCAAGCTCATTGTATTATGCACTGTCTTAATCTCTTTTGTGAAGCTTCAGGGCAAAAGATTAATAGCCAAAAAACTGagatttatttctcaaaaaatgtTGATCAACACCTCAAGGAAGACATTTTAAATCACACAGGCTATACACAAGTCAATAATATGGGCAAGTATCTTGGGGCAAATATTTCCCCGGGAAGAACTACTAGGGGGAAGTTTAACAACATCATTAACAAAATTCAGAACAGGTTGAGTGGTTGGAAGCAACAATGTTTGAGCTTTGCTGGTAGACTTACTCTTTCTAAATCGGTTTTGAGCTCTATTCCTTACTATCATATGCAATATGCCAAGCTTCCCAAAACTCTTTGTGGCGAGATGGAAAAAATCCAGAGGAGTTTTTTATGGGGAGACACTGATCAATCCCGCCGACCTCATCTGGTTATGGAGACTCGACCTAATGGGATTTCAAATCTCCTTTTTGATGACATTTCCGGGGCTTGCATGCCTAGGAATATTCGTGCTCTTGTTGATGCTCCTGATATGGAGAGGTCTCCTATAAATTTCAAGAGGCTCTCACTCACTAATATCAAGATTGATTGA 735 0.3878 MDRLSHIIADQVEAQYWKPMRAGRHGPQISHLLFADDLLLFAEASIEQAHCIMHCLNLFCEASGQKINSQKTEIYFSKNVDQHLKEDILNHTGYTQVNNMGKYLGANISPGRTTRGKFNNIINKIQNRLSGWKQQCLSFAGRLTLSKSVLSSIPYYHMQYAKLPKTLCGEMEKIQRSFLWGDTDQSRRPHLVMETRPNGISNLLFDDISGACMPRNIRALVDAPDMERSPINFKRLSLTNIKID 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04569 244 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 5 206 - -
Tsu01g04569 244 PANTHER - 5 206 - -
Tsu01g04569 244 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 9 105 IPR000477 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04569 Tsu-Chr1 53270145 53276459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04569 218 244 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 81.481 1.73e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04569 - - aip:107605009 205.682