Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04568 ATGAGTCTCAAGCTTGGTCAAGTAACCACTATTGCTATCTCCTCAGCAGATATGGCAAAAGAGGTTCTTCTAACCAATGACCTATTCTTGTCAAACAGACCAATTCCTCAATCTGTGTCGGTTCATAACCACGAGCACTTTAGTCTTGCATTCATACCAGTTTCACCTCTTTGGAAGGAATTGAGAAAAATATGCAACACTCAATTATTTTCTCATAAGACTCTTGATGCCAGCCAAGGCGTTAGGCGCAACAAAATGCAGCAACTCCTCATTGATATCGATCAAAGCAGTCAAATCGGTGAAGCAATAGATATTGGAACAGCGGCGTTCAAGACTACCATAAATCTGTTATCAAACACTATTTTCTCAGTGGATTTGATTCAGTCTAATGGTGAAGCCGGCGAGTTCAAGGACGTGGTGACTAATATTACAAAACTTGTTGGCTCGCCAAACGTGGCAGATTTTTTCCCTATATTGCAGATGGTTGATCCGCAAGGCGTCAAAAGAAAACAAGCAAAGAATGTAAGGAAAGTGTTGGACATCTTTGAAGACTTGATTAACCAACGTTTGAAGACGAGGGAAGGCTCGTGCATAGACACCAACAAAGACATGTTAGATGCTATGCTCAACATTTCTAAGGATAATGAGTTTATGGACAAAAATATGATCCAACATCTAGCACATGTATATACAACAGCATCTACTCTCGAATGGGCGATGACAGAGCTTGTCTGCAACCCAGAAGTCATGCTGAAGGCCAAAAGAGAGTTAGAACAAATGATTGGTTCTGGTGTCCCGCTCGAGGAGTCAGATATCTCTAAACTCCCATACTTACAAGCGATAATAAAAGAGACATTTCGGTTGCACCCGCCAGTGCCATTTTTACTACCACGAAAAGCTGAGAGGAATGTTGACATAGGTGGCTACACTATCCCGAAGGACGCGCACGTGCTAGTTAATGTGTGGAATATTGGCAGAGATCCCACTATATGGGTGAATCCAACATTGTTTTCACCAGAAAGGTTCTTGGGATCAGAGATTGATGTCAAAGGTCGGAATTTTGAGCTTGCACCATTTGGTGCTGGACGACGAATATGCCCCGGCTTACAACTGGCTAATAGGATGCTGCTACTAATGTTGGGGTCACTAGTTAACTCCTTTGATTGGAAGCTTGAAGGTGACATGAAACCAGAAGATATGGATATGGATGATAAATTCGGCATTACCTTGCAAAAGGCACAACCCCTTCGAATTGTTCCTCTCAAATTAAGCAAATAA 1278 0.421 MSLKLGQVTTIAISSADMAKEVLLTNDLFLSNRPIPQSVSVHNHEHFSLAFIPVSPLWKELRKICNTQLFSHKTLDASQGVRRNKMQQLLIDIDQSSQIGEAIDIGTAAFKTTINLLSNTIFSVDLIQSNGEAGEFKDVVTNITKLVGSPNVADFFPILQMVDPQGVKRKQAKNVRKVLDIFEDLINQRLKTREGSCIDTNKDMLDAMLNISKDNEFMDKNMIQHLAHVYTTASTLEWAMTELVCNPEVMLKAKRELEQMIGSGVPLEESDISKLPYLQAIIKETFRLHPPVPFLLPRKAERNVDIGGYTIPKDAHVLVNVWNIGRDPTIWVNPTLFSPERFLGSEIDVKGRNFELAPFGAGRRICPGLQLANRMLLLMLGSLVNSFDWKLEGDMKPEDMDMDDKFGITLQKAQPLRIVPLKLSK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04568 425 Gene3D Cytochrome P450 1 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 424 - -
Tsu01g04568 425 Pfam Cytochrome P450 2 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS P450 superfamily signature 357 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS P450 superfamily signature 227 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS P450 superfamily signature 280 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 424 - -
Tsu01g04568 425 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 359 368 IPR017972 GO:0005506|GO:0016705
Tsu01g04568 425 PRINTS E-class P450 group I signature 236 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS E-class P450 group I signature 366 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS E-class P450 group I signature 356 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS E-class P450 group I signature 320 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 PRINTS E-class P450 group I signature 279 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04568 425 SUPERFAMILY Cytochrome P450 2 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04568 Tsu-Chr1 53262771 53264976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04568 1 422 Cytochrome P450 AT2G45570 45.767 2.61e-133 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04568 - - gmx:100807367 640.958