Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04546 ATGCCAGTAAGGCAAATGAAAGAAAGCTCAGAGCAACACATTGTGATCAAAACCAATTTGCAGAACCCTAAGAATCAACCAAAGGCTTCTCAAAATGGAAAAGCTTCATCACCACCAAATTCAGTAGAAAACAATAGCCAAATTTCACCTCAAGTAAGGaacaaaggaagaagaagaggaagaggtggAAGAAAATCTGATCAAGCAGAAATTTTGATGAGACCAAGTTCAAGACCATGTACAGCAATAACTAGTAACATTGATGTTGGTTTTCCTTCTTCAAGCAAGTCTTTGAACTTTGCTCCTAGACCTGGATTTGGAACAGTTGGGACAAAATGTATTGTGAAGGCTAATCACTTCTTTGCAGAGTTACCAGACAAGGACTTAAACCAATATGATGTTACTATTACCCCTGAAGTGTCATCAAGAACAGTAAACAGGTCCATTATAGCTGAGCTTGTGAAGTTGTATAAAGAGTCTGACTTAGGGATGAGGCTTCCAGCTTATGATGGCAGAAAAAGTCTGTATACTGCAGGACAGCTACCCTTTTCATGGAAAGATTTTAAGATTAACCTTgtagatgaagatgatggaCTTAATTGCCCCAAaAGGGTAAAAGAGTACAGGGTGGTGATCAAGTTTGTTGCTAGAGCAAACTTGCATCATTTAGGACAGTTTCTAACTGGTAAGCGTGCCGATGCACCGCATGAGCCAGGAGGCGCTTCAAATTCTTGA 735 0.3728 MPVRQMKESSEQHIVIKTNLQNPKNQPKASQNGKASSPPNSVENNSQISPQVRNKGRRRGRGGRKSDQAEILMRPSSRPCTAITSNIDVGFPSSSKSLNFAPRPGFGTVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRSIIAELVKLYKESDLGMRLPAYDGRKSLYTAGQLPFSWKDFKINLVDEDDGLNCPKRVKEYRVVIKFVARANLHHLGQFLTGKRADAPHEPGGASNS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04546 244 MobiDBLite consensus disorder prediction 1 72 - -
Tsu01g04546 244 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 54 237 - -
Tsu01g04546 244 PANTHER PROTEIN ARGONAUTE 10 54 237 - -
Tsu01g04546 244 MobiDBLite consensus disorder prediction 12 53 - -
Tsu01g04546 244 Pfam N-terminal domain of argonaute 112 236 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04546 Tsu-Chr1 53015540 53017024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04546 1 237 Eukaryotic Initiation Factors Gene Family AT5G43810 52.593 2.77e-81 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04546 K11593 - gmx:100807513 360.533