Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04525 ATGAACGGCGCAAGCACCATCACCTCCGTCCGATCCATCCTTGACAAACCACTTAACCAGCTAACCGAAGATGACATTTCTCAACTCACTCGTGAAGACTGTCGCAGATTCCTCAAAGATAAAGGGATGCGCAGGCCTTCATGGAACAAATCTCAGGCGATCCAGCAAGTCATTTCTCTCAAAGCACTTCTAGAACCTTCCAACGATGATCTCCCCGCTCCCGTCGGTGTCTCCTCCGCtattcaccaccatcatcaccACCATCCTCAACTTCCTCAGAGGAATTTGAATGAAGCTCCGGCGAAGGGTTCCGATCCCGATGATACCGGTTTTCATGTTGTGGAGGATCTTAAGAAATCCACTTCAACTGCTGTGGAGAAACATACTGATACCAATGATGCCAATGTTGTTAAACCCTCCGGGGGTTGCACAGCTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCGGATAAGGCACGGTCAATCATGCAGCTTGCTGCATGTCCATCTTCGTTTCCTCAGGacaatcttttaaataaaaatgcagCAGTTTGGGCTTCTCCTTGCAACATACCGATTGATAAGGATGCCCTCTTTCCCAATGACACAGCAATCCTTCAGGTTGCTCAAACAGATAAGATGGTGGAATATCCTCTGCAATACAGGGAGAAAGGGAGTGTAGCTCGTGATGCTGaTGTAGACGGTCAGGCAAGCAGAAAAGAGTCGCTGCAGCGATATCGTGAAAAGCGAAAGGACAGGGGAAGACTGAAGGGCAACAAACTGACTGGCATAACTTCACCTAACTTAGAGATGTATTTGAATCTTCCAGTGAAGCTCCATCCCTCAAATGGTAATTCAAGTCGTAGTAGCACTGACTCTCCACCACAGCCTAGACTGCCTCTAGTTTCCGGTGGCTCAGCTGAAAACCAGCCAAAAGTTACCCTTCCCATTGATTTGAATGATAAAGATGTTCAAGAATGCTAA 1020 0.4539 MNGASTITSVRSILDKPLNQLTEDDISQLTREDCRRFLKDKGMRRPSWNKSQAIQQVISLKALLEPSNDDLPAPVGVSSAIHHHHHHHPQLPQRNLNEAPAKGSDPDDTGFHVVEDLKKSTSTAVEKHTDTNDANVVKPSGGCTASGSFGQMTIFYCGKVNVYDGVSPDKARSIMQLAACPSSFPQDNLLNKNAAVWASPCNIPIDKDALFPNDTAILQVAQTDKMVEYPLQYREKGSVARDADVDGQASRKESLQRYREKRKDRGRLKGNKLTGITSPNLEMYLNLPVKLHPSNGNSSRSSTDSPPQPRLPLVSGGSAENQPKVTLPIDLNDKDVQEC 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04525 339 MobiDBLite consensus disorder prediction 74 106 - -
Tsu01g04525 339 Pfam tify domain 151 179 IPR010399 -
Tsu01g04525 339 MobiDBLite consensus disorder prediction 289 339 - -
Tsu01g04525 339 MobiDBLite consensus disorder prediction 127 141 - -
Tsu01g04525 339 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 315 IPR040390 -
Tsu01g04525 339 MobiDBLite consensus disorder prediction 238 261 - -
Tsu01g04525 339 MobiDBLite consensus disorder prediction 121 141 - -
Tsu01g04525 339 Pfam Jas motif 248 265 IPR018467 -
Tsu01g04525 339 MobiDBLite consensus disorder prediction 238 275 - -
Tsu01g04525 339 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 8 315 - -
Tsu01g04525 339 MobiDBLite consensus disorder prediction 291 309 - -
Tsu01g04525 339 ProSiteProfiles Tify domain profile. 145 180 IPR010399 -
Tsu01g04525 339 SMART tify_2 145 180 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04525 7 286 Tify Gene Family AT4G14720 44.674 1.43e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tsu01g04525 tify 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04525 - - gmx:100813937 459.529