Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04501 ATGACTGACCTTACAAATAAGAGAAAAACTTACAGGTTGCTTAGCTTCACTAGAAGTGAAGTGTACACTGCAAACCCTGCTAATATTGAGCATATGCTAGTCACAAACTTCTCAAACTATGGCAAGGGTTGGTATCACCACAGTGTCTTGGAAGATTTACTGGGAGATGGTATATTCACAGTGGACGGAGAGCAGTGGCGACATCAGAGAAAATCAGCAAGCTATCAATTCTCAACTAAGTTATTGAGAGAATTCAGCAGCTCAGTGTTCAAATCCAATGCAGTAAAACTTGCAGGGATAGTGTCTGAAGCTGCAATCTCAAACAATATTATTGAACTGCAGGACCTGTTCATGAAATCAACTCTAGATTCTGTATTCAAGGTTATTCTTGGTGTAGAATTGGACACAATGTGTGGAACCTATAGAGAAGGTACACAATTTTCCATTGCTTTTGATGAAGCAAGTGAAGCTATCATGTTTCGGTATGTTAACTTTCTCTGGAAGGTTCAGCGGTTCTTGAACATTGGATCGGAAGCAGTACTCAAAAAAAGCCTAAGAGTGATCGACGACTACGTATACAAAGTAATCACAAGCAAGATTGAGCAATCTCAAAAGCCACAAGATAACTCTCTTGGGCTGAAAGGAGACATTTTGTCAAGGTTTCTAGAATTGAATGAGACAGATTCAAAGTACCTTAAAGACATTATTTTGAGTTTTATCATTGCAGGGAAAGATACAACAGCAATCACTCTTTCTTGGTTTATTTACCAACTCTGCAAGCATCCTCATGTGCAGGAAACGATTGCGCAAGAGATTAGGGACGTAACAAAATTAGAAAATGGTTTAACCATTGATGAACTTGCAGCTAAAGTAACTAAAGAAAACATGAAAAAGATGCAGTATCTGCATGCAGCTTTGACCGAAACTATCAGGCTCCATCCAGCAGTTCCAGTGGAAAGCAGGTATTGTTTTTCGGATGACACGCTACCAGATGGATATAGTGTGAGGAAAGGTGATCTTGTTTCATTCCAACCATATGTCATGGGAAGGATGAAATTCTTGTGGGGTGAAGATGCTGAGCAATTCAGGCCAGAGAGATGgcttgatgaaaatggaaattTTAAGAAAGAAAGCTCTTTTAAGTTCACTGCCTTCCAGGTATGGAACATTCTATAA 1176 0.3878 MTDLTNKRKTYRLLSFTRSEVYTANPANIEHMLVTNFSNYGKGWYHHSVLEDLLGDGIFTVDGEQWRHQRKSASYQFSTKLLREFSSSVFKSNAVKLAGIVSEAAISNNIIELQDLFMKSTLDSVFKVILGVELDTMCGTYREGTQFSIAFDEASEAIMFRYVNFLWKVQRFLNIGSEAVLKKSLRVIDDYVYKVITSKIEQSQKPQDNSLGLKGDILSRFLELNETDSKYLKDIILSFIIAGKDTTAITLSWFIYQLCKHPHVQETIAQEIRDVTKLENGLTIDELAAKVTKENMKKMQYLHAALTETIRLHPAVPVESRYCFSDDTLPDGYSVRKGDLVSFQPYVMGRMKFLWGEDAEQFRPERWLDENGNFKKESSFKFTAFQVWNIL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04501 391 SUPERFAMILY Cytochrome P450 9 385 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04501 391 PANTHER CYTOCHROME P450-RELATED 1 387 - -
Tsu01g04501 391 Gene3D Cytochrome P450 5 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04501 391 PRINTS E-class P450 group I signature 231 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04501 391 PRINTS E-class P450 group I signature 251 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04501 391 PRINTS E-class P450 group I signature 303 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04501 391 Pfam Cytochrome P450 9 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04501 391 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04501 391 PRINTS P450 superfamily signature 242 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04501 391 PANTHER CYTOCHROME P450 1 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04501 Tsu-Chr1 52632773 52634336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04501 2 387 Cytochrome P450 AT2G45510 51.276 3.42e-137 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04501 - - pvu:PHAVU_007G063800g 600.512