Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04498 atggcTAAGTATCAAATCACTTCAATGGAAAAAATGAGTTGCATTCTAACATGTTTCCTCTTGAGTATTGTCTTATCAACAAATGCTGAATTTACCAAAAAGACTTACATCATTCAAATGGATCACTCAGCAAAACCAGATATATTTTCCAATCACATAGAATGGTATTCATCAAAAGTAAAATCAGTATTGTCTAAATCAGTAGAATCTGATATAGACAACAATGAAGAAGAGAGAATCATTTACAGTTACAACACTGCTTTTCATGGAATGGCTGCTAAATTAAGCCaagaagaagtaaaaaagctAGAATCTGAAGCTGGTGTTGTAGCCATATTCCCTGAAACAAAGTATGAACTACACACAACAAGAAGTCCATATTTTCTTGGTCTTGAACCAATCCAAAATAGCAACAACAATAGTTTTTCAGAAAAGCTGGTTAACCATGATGTTGTAGTTGGTGTGTTAGACACTGGTGTTTGGCCTGAGAGTGAGAGTTTCAATGATGCAGGAATGAAACCAGTACCTTCTCACTGGAAAGGTGTATGTGAAACTGGTAGAGGATTCAGAAATCATCACTGCAATAAGAAGATTGTAGGTGCAAGAATATTCTACCATGGATATGAAGCAGCAACTGGTAAGATTGATGAGCAAGCAGATTATAAATCACCAAGAGATCAAGATGGTCATGGAACTCACACTGCAGCTACTGTTGCCGGATCTCCAGTTCGTGGGGCTAATCTTTTTGGTTATGCTTATGGAACTGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCTTACAAAGTGTGTTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCTGTTGATACAGCTGTAGCTGATGGAGTAAATGTTCTATCCATCTCTTTAGGTGGTGGAGTCTCATCTTACAATCATGATAGTTTAGCTGTAGCTGCATTTGGAGCCATGGAAAAGGGTGTTTTTGTTTCATGCTCAGCTGGAAATTCAGGACCTGACCCTGTCAGCCTAACAAATGTGTCACCATGGATCACCACAGTTGGAGCTAGCACAATGGACAGAGATTTTCCTGCAGATGTTAGCCTTGgaaatggaagaaaaataaCAGGAACATCACTCTATAAAGGAAAAACCATGCTCTCAGTTAGAAAACAATACCCTTTGGTATACATGGGAGGTAACTCAAGTAGTCCTGATCCAAGATCTTTGTGCTTGGAAGGTACTTTAGATCGTCGAATCGTCACTGGAAAGATTGTGATTTGTGATAGAGGAATTAGTCCTAGAGTGCAAAAGGGTCAAGTAGTGAAAAATGCAGGAGGAGTAGGAATGATTCTCACAAACACTGCAGCAAATGGAGAAGAACTTGTAGCAGATTGTCACCTACTTCCAGCAGTAGCAATAGGAGAAAGAGAAGGCAAAGAAATCAAACAATATGtgttaacaaataaaaaagcaacTGCTACATTAGCTTTTCTTAATACAAGATTAGGAGTTAAACCATCACCTATAGTAGCTGCATTTTCATCAAGAGGGCCTAATTTTCTAACACTTGAAATTCTTAAACCTGATATAGTAGCACCTGGTGTGAACATTCTTGCTGCTTGGAGTGGAGTTACTGGTCCATCAAGTTTATCAACAGATCATAGAAGAGTGAAATTTAATATACTTTCCGGAACTTCGATGTCATGTCCTCATGTAAGTGGAATCGCCGCTTTAATCAAAGCTAAACATCCTGATTGGAGTCCGGCCGCTATAAAATCAGCAATCATGACAACAGCTTATGTTCATGATAATACTATTAAGCCTCTTAGAGATGCTTCTTCTGCTGAATTTTCAACTCCTTATGATCATGGTGCTGGTCACATTAATCCTAGAAAAGCTCTTGATCCTGGTTTAGTATATGATATTGCACCTCAAGATTATTTTGAGTTTCTTTGCACACAGAAACTAAGTCCTTCAGAATTAGGAGTGTTTGCCAAAAGTTCAAACAGAATTTGCAAACACACTCTTGCTAGTGTTGGTGACTTGAACTATCCAGCTATATCAGTAGTGTTTCCAGAGAAAATAACTGGTTCAGTTTCGACGGTTCACAGAACTGTTACCAATGTTGGTCCTGCTGTTTCAAAATATCATGTAATTGTTACACCATTCAAAGGTACTGTTGTTAAAGTTGAACCAGATACATTGaattttacaagaaaatatcaGAAATTATCTTACAAGATTAGTTTCAAAGTTACAACAAGGCAAAGTGAACCAGAATTTGGAGGTTTGGTGTGGAAAGATGGGGTGCATAAAGTAAGAAGTCCCATTGTGATAACATATCTGCCACCAATTTGA 2349 0.3725 MAKYQITSMEKMSCILTCFLLSIVLSTNAEFTKKTYIIQMDHSAKPDIFSNHIEWYSSKVKSVLSKSVESDIDNNEEERIIYSYNTAFHGMAAKLSQEEVKKLESEAGVVAIFPETKYELHTTRSPYFLGLEPIQNSNNNSFSEKLVNHDVVVGVLDTGVWPESESFNDAGMKPVPSHWKGVCETGRGFRNHHCNKKIVGARIFYHGYEAATGKIDEQADYKSPRDQDGHGTHTAATVAGSPVRGANLFGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDTAVADGVNVLSISLGGGVSSYNHDSLAVAAFGAMEKGVFVSCSAGNSGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKITGTSLYKGKTMLSVRKQYPLVYMGGNSSSPDPRSLCLEGTLDRRIVTGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAIGEREGKEIKQYVLTNKKATATLAFLNTRLGVKPSPIVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGVTGPSSLSTDHRRVKFNILSGTSMSCPHVSGIAALIKAKHPDWSPAAIKSAIMTTAYVHDNTIKPLRDASSAEFSTPYDHGAGHINPRKALDPGLVYDIAPQDYFEFLCTQKLSPSELGVFAKSSNRICKHTLASVGDLNYPAISVVFPEKITGSVSTVHRTVTNVGPAVSKYHVIVTPFKGTVVKVEPDTLNFTRKYQKLSYKISFKVTTRQSEPEFGGLVWKDGVHKVRSPIVITYLPPI 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04498 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 776 IPR045051 -
Tsu01g04498 782 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Tsu01g04498 782 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Tsu01g04498 782 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Tsu01g04498 782 Gene3D Peptidase S8/S53 domain 150 644 IPR036852 GO:0004252|GO:0006508
Tsu01g04498 782 Pfam Peptidase inhibitor I9 35 121 IPR010259 -
Tsu01g04498 782 ProSiteProfiles Serine proteases, subtilase domain profile. 128 631 - -
Tsu01g04498 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 121 IPR037045 -
Tsu01g04498 782 Pfam Fibronectin type-III domain 678 776 IPR041469 -
Tsu01g04498 782 Pfam PA domain 388 478 IPR003137 -
Tsu01g04498 782 SUPERFAMILY Subtilisin-like 120 635 IPR036852 GO:0004252|GO:0006508
Tsu01g04498 782 CDD PA_subtilisin_like 362 492 - -
Tsu01g04498 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Tsu01g04498 782 Pfam Subtilase family 149 601 IPR000209 GO:0006508|GO:0008236
Tsu01g04498 782 Gene3D - 648 779 - -
Tsu01g04498 782 CDD Peptidases_S8_3 118 597 IPR034197 -
Tsu01g04498 782 PANTHER XYLEM SERINE PROTEINASE 1 25 776 - -
Tsu01g04498 782 Gene3D - 356 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04498 Tsu-Chr1 52601006 52604356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04498 20 782 Subtilisin-like Serine Gene Family AT5G51750 70.710 0.0 1140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04498 - - gmx:102661592 1324.69