Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04497 ATGTCCAcgtcatcaccaccaccacctcaaacaaacaacaaccaTAACTCCACCGTCATCTCCGGTTGCTCTTTCATCCTCGCACTTCTCCACTGCCTCCGCAACAAAAAACGAACTACTCCATCCTCCGATTCAGACTCAAATCCTCCTCATCCTTTCTCATACTCCCTCCTCCGCCGCGCAACAAACTCATTCTCAACTATCCTCGGTCATGGCGGTTTCGGTCCTGTCTACTCCGGTATTCTTCCTTCCTCCGGTAAACCAATCGCCGTCAAGCTAATGAATTCCACAACCCTCGGCGGTCAAGGCGAACGTGAATTCCATAACGAACTCTTCTTCGCTTCCAGACTTCAATCCAACCTCCTTGTCCCTGCAATCGGCTTTTCCTCCGATCCAAAACGCCGTCGTTTTATTCTCGTCTATGACCTTATGCAAAACGGTAACCTCCATGAAGCTCTATTCCGTCGTAAATGTTCTGAATTAACGCTATGGAAAACGCGGTTTTCTATAATTATTGATATTGCTAAAGGAATTCAATATCTTCATTCATGTGATCCACCAATTATTCATGGTGATATTAAACCTAGTAATATTCTTCTTGATCATTCCTTTTCTGCTAAAATTGCTGATTTTGGACTTGCTAGGTTGAAATCACTTTCCCCTTCCGAAATTAGAAAAGAGGGATTTGAGAGTGATGAAACGGAAATTGAAAGTGTTATTACTAGCTTTGAGGATTATGAAACAGACATGgttggtgttggtgttgttgGTGGTGGAGTGAAGAAGAGTGGGAGTGTGAAGGATTATGTGATGGATTGGATTGGAAAAGAGGTGAAGGAGGAGAAGTTAAAGAATGATGATTTGGTGGGTGGAAGTGGGATTGGAAAAGGAGAGAAAGGCAAGAGCAAGAAGAAATTGGAATGGTGGGAATCAATGGATGAGAGAAAGGAAAAGAGTGATttgaagaagaaggagaagagaaGACCAGCAAGGGAATGGTGGAAGGAGGAGTATTCTCAAGAACTTgaaaagaagaataagaaaaagGGTGGAAAAAAGGGTGATAATTGGTGGGAATGGGAGAGAGATCATGATGTGAAAAAAGGTAGTAGTAAAAATCGTGGCAGAAAGGATCGTGGTAGTGGTGATTCATGGTTTAGTGGTGAGTTGAGGAGAGTTAATTGGAATAGTTATGATTCATGTAATAGTGGAGAGATTCACAAGAGTGGTGAAATCAGTAGTACTGCAAGTATGAGAGGAACTGTTTTTTATGTTGCTCCTGAAAATGGTTATAGTGGCGGTGATGTAACAGAGAAGAGCGATGTTTATAGTTTTGGTGTGTTATTGCTTGTTATTGTTTCTGGGAGAAGACCTCTTCAGGTGAATGATGGTGGTAGTAGTGGTGGTAATAGATTCACGCAGTTTAAGCGAGCGAATTTGGTGTCTTGGGCTAGACATTGTGCGCGTAATGGGAAACTACTTGAACTAGTTGATCCTTCTGTTGAGGAGTTGTTATTGGATGATAAAGAGCAGGCTCTTTTATGTATCAAGATTGCATTGCTTTGTTTGCTCAAGTCACCTAATCGTCGTCCTTCAATGAAAGAAGTTGCGGGAATGCTTTGTGGGGAATTGGAACCGCCTCAATTGCCGCCTGACTACTCACAATCTCGATACCAATTCAAGAATCGAAAAGAATGTTCATGA 1704 0.3985 MSTSSPPPPQTNNNHNSTVISGCSFILALLHCLRNKKRTTPSSDSDSNPPHPFSYSLLRRATNSFSTILGHGGFGPVYSGILPSSGKPIAVKLMNSTTLGGQGEREFHNELFFASRLQSNLLVPAIGFSSDPKRRRFILVYDLMQNGNLHEALFRRKCSELTLWKTRFSIIIDIAKGIQYLHSCDPPIIHGDIKPSNILLDHSFSAKIADFGLARLKSLSPSEIRKEGFESDETEIESVITSFEDYETDMVGVGVVGGGVKKSGSVKDYVMDWIGKEVKEEKLKNDDLVGGSGIGKGEKGKSKKKLEWWESMDERKEKSDLKKKEKRRPAREWWKEEYSQELEKKNKKKGGKKGDNWWEWERDHDVKKGSSKNRGRKDRGSGDSWFSGELRRVNWNSYDSCNSGEIHKSGEISSTASMRGTVFYVAPENGYSGGDVTEKSDVYSFGVLLLVIVSGRRPLQVNDGGSSGGNRFTQFKRANLVSWARHCARNGKLLELVDPSVEELLLDDKEQALLCIKIALLCLLKSPNRRPSMKEVAGMLCGELEPPQLPPDYSQSRYQFKNRKECS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04497 567 Gene3D Transferase(Phosphotransferase) domain 1 55 237 - -
Tsu01g04497 567 Pfam Protein kinase domain 67 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g04497 567 Pfam Protein kinase domain 411 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g04497 567 ProSiteProfiles Protein kinase domain profile. 63 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g04497 567 SUPERFAMILY Protein kinase-like (PK-like) 47 553 IPR011009 -
Tsu01g04497 567 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 567 - -
Tsu01g04497 567 Gene3D Transferase(Phosphotransferase) domain 1 397 547 - -
Tsu01g04497 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Tsu01g04497 567 MobiDBLite consensus disorder prediction 544 567 - -
Tsu01g04497 567 PANTHER OS07G0586332 PROTEIN 1 567 IPR044576 -
Tsu01g04497 567 SMART serkin_6 63 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04497 Tsu-Chr1 52595088 52597375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04497 420 540 Receptor kinase-like Gene Family AT3G58690 33.607 3.01e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Tsu01g04497 Pkinase 1.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04497 - - aprc:113872924 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03228 06 42810001 42812395 Tsu01g04497 01 52595088 52597375 PCT