Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g04493 | ATGTCCTGGAAATGTTtatgttgttttctttctaATGAAGAAGAGCATAGCCAAAGAAGGAATGttgatgacaaaaaaaatgttgttagGGACTATCCATGGGACAGATACACCTTGAAGGAATTGCTTCGTGCAACAAACAATTTTCATCAAGATAACAAGATTGGAGAAGGTGGATTTGGAAGTGTATATTGGGGTCAAACAAGTAAAGGCATTGCTGTGAAGAGATTGAAGACAATGACTGCAAAAGCAGAGATGGAATTTGCAGTTGAAGTGGAAGTACTTGGAAGGGTTAGGCATAGGAATTTGTTAGGATTAAGGGGATTCTATGCAGGAGGAGAAGAAAGGTTAATTGTGTATGATTACATGCCTAATCATAGTTTACTCACTCATTTACATGGTCAACTTGCCTCTGATTGTTTACTAGATTGGTCTAGAAGAATGAGCATAATAATTGGTGCAGCTGAAGGTTTAGCGTATTTACACCATGAGGCAAATCCTCACATAATTCATAGAGACATAAAAGCAAGCAATGTTCTTCTAGACACAGAATTTCAAGCCAAGGTAGCTGATTTTGGTTTTGCAAAGTTAATACCAGCAGGTGTAAGTCATCTAACAACAAGAGTTAAAGGCACACTTGGTTATTTAGCACCAGAATATGCTATGTGGGGTAAAGTTTCTGAGAGTTGTGATGTTTATAGTTTTGGAATTTTACTTTTGGAAATTATTAGTGCAAAAAAACCAATTGAAAAACTACCTGGTGGAATAAAAAGAGACATTGTTCAATGGGTCACACCTTATGTACAAAAGGGTGTTTTTAAGCATATTGCTGATCCAAAATTAAAAGGGAATTTTGATTTAGAACAATTGAAATCAGTGATTATGATAGCTTTGAAATGCACTGATGGTAGTCCTGATAAAAGGCCTAGTATGGAAGAGGTTGTTGAATGGCTTAGGGATGGTGgttcaaagagaaaaaaagatgtTTCAAATTTGAGTAACAATAAGGGTGATGATGAAGGAAATGATGAAAACTATGAAGAGTTTGTAACAATGCAAACCAatcatttgaaaataataagTGATAATGATAGGCGCAAAatgagatga | 1110 | 0.3342 | MSWKCLCCFLSNEEEHSQRRNVDDKKNVVRDYPWDRYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGIAVKRLKTMTAKAEMEFAVEVEVLGRVRHRNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLASDCLLDWSRRMSIIIGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFKHIADPKLKGNFDLEQLKSVIMIALKCTDGSPDKRPSMEEVVEWLRDGGSKRKKDVSNLSNNKGDDEGNDENYEEFVTMQTNHLKIISDNDRRKMR | 369 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g04493 | 369 | MobiDBLite | consensus disorder prediction | 323 | 340 | - | - | |
Tsu01g04493 | 369 | MobiDBLite | consensus disorder prediction | 323 | 345 | - | - | |
Tsu01g04493 | 369 | PANTHER | OS01G0253100 PROTEIN | 4 | 343 | IPR045271 | GO:0004714|GO:0006468 | |
Tsu01g04493 | 369 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 169 | 181 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu01g04493 | 369 | SMART | serkin_6 | 49 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu01g04493 | 369 | Gene3D | Transferase(Phosphotransferase) domain 1 | 123 | 334 | - | - | |
Tsu01g04493 | 369 | SUPERFAMILY | Protein kinase-like (PK-like) | 33 | 321 | IPR011009 | - | |
Tsu01g04493 | 369 | ProSiteProfiles | Protein kinase domain profile. | 49 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu01g04493 | 369 | Pfam | Protein kinase domain | 49 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu01g04493 | 369 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 4 | 343 | - | - | |
Tsu01g04493 | 369 | Gene3D | Phosphorylase Kinase; domain 1 | 10 | 122 | - | - | |
Tsu01g04493 | 369 | ProSitePatterns | Protein kinases ATP-binding region signature. | 55 | 75 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g04493 | Tsu-Chr1 | 52568768 | 52571221 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g04493 | 36 | 331 | Receptor kinase-like Gene Family | AT1G60800 | 45.183 | 1.04e-81 | 258 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XV | Tsu01g04493 | Pkinase | 5.2e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g04493 | - | - | gmx:100817283 | 588.571 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu01g04493 | 01 | 52568768 | 52571221 | Tsu01g04493 | 01 | 52568768 | 52571221 | ECH |