Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04492 atggaTCCCTACAAAACACTTAACTTAATCCACAACCCAAACGGCACCGTCACACGTTTAGACAAATACCCACAATCCCCACCCTCACCAGATCCCAATCTCCCAACACCCGCTCTCTCCAAAGACCTCACCATCAACCATTCAAAACACACTTGGGCACGAATCTACCTACCTCACAAATCACCACACTCCAAACTACCCCTCATCGTTTTCTACCATGGCGGTGGCTTCATTTTCTACAGCGCCGCTTCAACTTACTTCCACAACTTCTGCGACAACCTCGCTAATCAAACTCAATCCGTCGTCGTTTCACTCGACTACCGTCTCGCTCCAGAACACCGTCTTCCAGCAGCGTACGATGACTCCGTGGAAGTGCTACACTGGATTAAAACCTCAAACGATCCATGGTTGACACGTCACGTTGATTATTCTCGTTGTTATTTAATGGGAGAGAGTGCTGGAGGAAATATCGCCTATAACGCGGGTCTACGTGCAGCTTCAATAGTTGATGAGATTAAACCGGTTAATATCAAAGGGTTGATATTGATTCAACCGTTTTTTGGTGGGACAAAGAGGACACCGTCTGAATTAAGACTTGAGAAGGATTTAAATCTACCGTTGATTGTTACTGATGCGATGTGGAATTTGTCGTTGCCCTTAGGCGTTGATCGTGATTACGTGTATTCTAATCCAACGGTGAATGGCGGGGGTAAGATTTTGGATAAGATAAGGTTGTTTGGGTGGAAGGTTGCGGTGTTTGGTTGTGATGGGGATCAACTTGTGGATCGACAGAGGGAATTGGTGAAGTTGCTTGAGGGTAAAAGTGTCAATGTAGTGGGTCAATTTTATAGTGGGGGTAGACATGGTATTTTTGTGGGTGATGCTTCCATGTCTGAAAAGGTGTTCAATTTAGTTAAGAGTTTTTATTGA 930 0.4462 MDPYKTLNLIHNPNGTVTRLDKYPQSPPSPDPNLPTPALSKDLTINHSKHTWARIYLPHKSPHSKLPLIVFYHGGGFIFYSAASTYFHNFCDNLANQTQSVVVSLDYRLAPEHRLPAAYDDSVEVLHWIKTSNDPWLTRHVDYSRCYLMGESAGGNIAYNAGLRAASIVDEIKPVNIKGLILIQPFFGGTKRTPSELRLEKDLNLPLIVTDAMWNLSLPLGVDRDYVYSNPTVNGGGKILDKIRLFGWKVAVFGCDGDQLVDRQRELVKLLEGKSVNVVGQFYSGGRHGIFVGDASMSEKVFNLVKSFY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04492 309 MobiDBLite consensus disorder prediction 1 40 - -
Tsu01g04492 309 Pfam alpha/beta hydrolase fold 69 291 IPR013094 GO:0016787
Tsu01g04492 309 MobiDBLite consensus disorder prediction 9 23 - -
Tsu01g04492 309 Gene3D alpha/beta hydrolase 4 309 IPR029058 -
Tsu01g04492 309 SUPERFAMILY alpha/beta-Hydrolases 22 299 IPR029058 -
Tsu01g04492 309 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 8 307 - -
Tsu01g04492 309 PANTHER ARYLACETAMIDE DEACETYLASE 8 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04492 Tsu-Chr1 52565913 52566842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04492 14 296 Carbohydrate Esterase AT5G16080 36.949 3.63e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04492 - - gmx:100777262 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04492 01 52565913 52566842 Tsu01g04492 01 52565913 52566842 ECH
Tsu06g03215 06 42670046 42671441 Tsu01g04492 01 52565913 52566842 PCT
Tsu01g04492 01 52565913 52566842 Tsu06g03216 06 42682214 42683239 PCT