Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04491 ATGTCAAGTCAACCCTTCTCACCACCTGAACTTATCGATCCCTTTCTTCATCTCAAAATCTCCCCAAATCCCGACGGCACAATTACACGCCTACGTGGAGACCCACACACTTCCCCCTCATCAAATCCCAACCATCCAATCCCCGTTCTCACCAAAGACATCTCCATCAATCCATCACACAAAACCACCGCCAGAATATTCCTCCCCCGCAAAACACTCGATCACACCCCCTTCCATAAACTTCCTATAATCATTTACTTTCACGGAGGCGGTTTCATCCTCTTCAGTGCAGCCTCTGATTTTCTTCATGATCTTTGCATAAACCTTGCAAACGACGTTAACTCCATCGTTGTTTCCGTTGACTATCGTTTAGCTCCAGAGCACCGTTTACCTGCTGCGTATGATGATGCTATGGAAGCTCTGCACTTGATCAAAACTCAATCAGATGATTGGTTGAGAAACTATGGTGATTATTCAAATTGTTACCTCATGGGAGGTAGTGCTGGAGCAAATATTGCATACAAAGCAGGTTTGCTTGTAGCTGCAGAGACTAATCTTCTTGAGCATGATTATCTGACGCCAGTTAGGATCAGAGGCTTAATATTGTCTCAACCGTTTTTTGGTAGTACTGAGAGGGTAGCTTCGGAGTTGAGGCTAGTAAATGATGCCGTTGTGCCGCCGCACGTGTGTGATTTAATGTGGGAGCTTTCGTTGCCGATTGGAGTTGACCGTGATCATGAATATTGCAATCCAACTGTTGGTGATGGTCTTGGGGATTTGGATAGGGTGAGGGAGCTTGGATGGAGGGTTTTGGTGACTGGGTGCGATGGGGACCCGTTGATGGACCATCAGATGGCGTTGGTGAGAGTGGTTGAAGAGAAGGGTGTTGTGGTGGTGAAAAGTTTTACAGAAGGGGGCTGTCATGGTGCTGAGGTTCGTGATCTCATCAAGCAAAAGCAATTGCACGACCTAATTAAAGATTTCATTTTTCTACAAAATTAA 1002 0.4571 MSSQPFSPPELIDPFLHLKISPNPDGTITRLRGDPHTSPSSNPNHPIPVLTKDISINPSHKTTARIFLPRKTLDHTPFHKLPIIIYFHGGGFILFSAASDFLHDLCINLANDVNSIVVSVDYRLAPEHRLPAAYDDAMEALHLIKTQSDDWLRNYGDYSNCYLMGGSAGANIAYKAGLLVAAETNLLEHDYLTPVRIRGLILSQPFFGSTERVASELRLVNDAVVPPHVCDLMWELSLPIGVDRDHEYCNPTVGDGLGDLDRVRELGWRVLVTGCDGDPLMDHQMALVRVVEEKGVVVVKSFTEGGCHGAEVRDLIKQKQLHDLIKDFIFLQN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04491 333 PANTHER CARBOXYLESTERASE 120-RELATED 9 330 - -
Tsu01g04491 333 MobiDBLite consensus disorder prediction 26 48 - -
Tsu01g04491 333 Gene3D alpha/beta hydrolase 15 331 IPR029058 -
Tsu01g04491 333 Pfam alpha/beta hydrolase fold 84 309 IPR013094 GO:0016787
Tsu01g04491 333 MobiDBLite consensus disorder prediction 33 48 - -
Tsu01g04491 333 PANTHER ARYLACETAMIDE DEACETYLASE 9 330 - -
Tsu01g04491 333 SUPERFAMILY alpha/beta-Hydrolases 19 324 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04491 Tsu-Chr1 52562716 52563820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04491 25 325 Carbohydrate Esterase AT5G16080 32.372 1.41e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04491 - - gmx:100777786 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03214 06 42667420 42668559 Tsu01g04491 01 52562716 52563820 PCT
Tsu01g04491 01 52562716 52563820 Tsu06g03215 06 42670046 42671441 PCT