Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04482 ATGAAGTTCTCATCTAACCCGCATTCTACAGTTGCGAGTTATTACCTAATTATGGCTATCAAATTACCAGCAGAAAATAGTTTTCCAATCATTTTCCTCCTTTTAACATTATTTTCATTATCTAAAGCTGAACTTCATGCTCATTACTATGACCAAACATGTCCAcaattggaaaaaataatttcagAGACAGTTCTTAATGCTTCTATCCATGATCCTAAAGTCCCAGCCCGTATTTTGAGGATGTTTTTTCATGACTGTTTCATAAGGGGTTGTGATGCATCAATATTGCTGGACTCAACTACCAGTAACCAAGCAGAGAAAGACGGACCTCCTAATATCTCAGTTCGATCGTTCTATGTAATTGATGAGGCTAAAGCAAAGCTTGAGTTGGCTTGCCCAGGCACTGTTTCTTGTGCTGATATACTTGCTATTTTAGCAAGAGATGTGGTGGCCATGTCTGGAGGTCCATATTGGAAAGTACTAAAAGGAAGGAAAGATGGAAGGGTATCAAAGGCATCTGATACCATCAACCTACCGGCCCCAACCTTGAATGTAGGTCAACTCATTCAGAGCTTTGCTAAGAGAGGGTTGGGAGTTAAAGATATGGTGACTTTATCTGGAGGACACACTCTGGGCTTCTCACATTGTTCTTCCTTTGAGGCTCGTCTTCATAATTTCAGTTCATTGCATCATATTGATCCAAGGTTGAACACTGAATTTGCACTAGACCTAAGCAAGAAATGTCCAAAACCAAACAACAACCCAAACGCAGGACAATTCCTGGACTCAACAGCATCAGTGTTTGATAATAACTATTACAAACAACTGCTGGTTGGAAAAGGTGTGTTTTCCTCCGATCAGTCACTAGCTGGTGATTACAGAACTAGATGGATTGTTGAAGCATTTGCAAGAGACCAGAGTTTGTTTTTCAAAGAGTTTGCAGCATCAATGCTGAAACTTGGAAATATAAGAGGCTCTGATAATGGAGAAGTGAGACTTAAATGCAGGATTGTGAATTGA 1023 0.392 MKFSSNPHSTVASYYLIMAIKLPAENSFPIIFLLLTLFSLSKAELHAHYYDQTCPQLEKIISETVLNASIHDPKVPARILRMFFHDCFIRGCDASILLDSTTSNQAEKDGPPNISVRSFYVIDEAKAKLELACPGTVSCADILAILARDVVAMSGGPYWKVLKGRKDGRVSKASDTINLPAPTLNVGQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFEARLHNFSSLHHIDPRLNTEFALDLSKKCPKPNNNPNAGQFLDSTASVFDNNYYKQLLVGKGVFSSDQSLAGDYRTRWIVEAFARDQSLFFKEFAASMLKLGNIRGSDNGEVRLKCRIVN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04482 340 Gene3D Peroxidase, domain 2 180 321 - -
Tsu01g04482 340 ProSiteProfiles Plant heme peroxidase family profile. 44 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 CDD secretory_peroxidase 44 339 IPR033905 GO:0004601|GO:0042744
Tsu01g04482 340 Gene3D - 48 340 - -
Tsu01g04482 340 PANTHER PEROXIDASE 66 25 339 - -
Tsu01g04482 340 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 Pfam Peroxidase 67 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Tsu01g04482 340 PANTHER PEROXIDASE 25-RELATED 25 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g04482 340 SUPERFAMILY Heme-dependent peroxidases 45 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04482 Tsu-Chr1 52485298 52487480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04482 28 340 Peroxidase AT5G51890 71.019 2.41e-169 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04482 K00430 - gmx:100799516 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04482 01 52485298 52487480 Tsu01g04482 01 52485298 52487480 ECH