Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04481 atgcATTCATCACTTAACAAAAAAGAAGTCACTAAAGTATGTCCACAAGGTTGTTGTCCAACTTTATTGTTCATCAACTCATCACAACAATCTCTCAACAACACAACTAAACCCAGAAACAGTTCTTCACAGTGTCGCCAAATCTttgcaacaacaacatcaacctCAATTTTTCCAAACACTAAATTCACTAACCATGAATCTCTTCCATCGCTTCATGAATCATTCACTGAATTCATGAAAGTGTATCCTCAATTCTCTGAGACTGAGAAAATTGACAGTTTAAGAGCTAAAGAATATTATCATCTTTCTTTCTTAAACCAATCTTGTCTTGATTATATTGGTATTGGTCTTTTTTCCTATTATCAACGTCAACAACATGATGTTTCAAAAACtcatctttcttcttcttctccttcaacttCAACACCTTTTCAATCTCCACAACAATATTCTGATATACCCTTTTTTAGTATTTCCTACAAAACTGGAAATTTGAAGACTTTATTACTTCATGGAGGGAAAGAATCAGAATTTGAGTCTGCAATGAGGAGAAGGATAATGAAATTTCTTAACATTTCTGAAAATGATTATTTCATGGTTTTCACAGCTAATAGAACATCAGCTTTTAAACTTGTTGCAGATTCATATCCATTTCAATCTTGTAAGAAACTTTTGACAGTTTATGATTATGAGAGTGAAGCAGTGGAAGCAATGATTAGTTCTTCAGAAAAAAGAGGAGCTAAATCCATGTCAGCAGAATTCTCATGGCCAAGACTGAGAATTCagtcaacaaaattgaagaagatgattGTTAGTGATAATAgtaataagaagaagaaaaagacaaaaagtGGTCTTTTTGTGTTTCCTCTTCATTCAAGAGTAACAGGTGCAAGGTATCCTTATCTATGGATGAGAACAGCACAAGAAAATGGATGGCATGTTTTGATTGATGCTTGTGCATTAGGACCAAAAGACATGGACAGTTTTGGTCTCTCTCTTTTTCAACCAGATTTTCTCATTTGTTCTTTCTACAAAGTTTTTGGAGAAAATCCATCTGGTTTTGGTTGCCTTTTTGTCAAGAAATCTTCTATTTCAATTCTTGAACCCTCCACTTGTGCAGGAATTGTGAATCTTGTACCAGAAAGTAGACTATTTAATCTATCAGAAGATTCTTCTAGTAACAATCAAGTAAAAGTTGATCAAAAATCACCAACTATCTTACAAGAACAAGAATTATCTTCTATGAGTTCTTTCTCTGGAAGGATGCAAACTCCACAATTTGTAAAAGTTGAAGGAGTTCAATCTGAGGAAATAAAAGCTCCTCAAGGTTGTGAAACTGTGGAGGAAAATAGGGTATTtgagaaaattcaaattaagAATGTGCAAGATAGTAAAAATGGAAGCTTTGAAATTGAATGCAGGTGTTTGGATCAAGTGGATTCTTTAGGATTGACAAAAGTAACCAACAGAGGAAGGTACCTCATAAATTGGTTAGTGAACTCATTGATGAAGCTGAAACATCCTAATGATGAAGGGGTTTCCTTAGTAAAGATCTATGGTCCTAAGATAAGATTTGATAGAGGACCTGCTTTGGCTTTCAATGTTTATGATTGGAAAGATAAGTATTCAGAAGAGAAAGGGAGAGTCCTGCAGAGTAAAGAAGGGAGAGGCGAGAAAGTAACGGCGAATAAGAAGAAAGATAGAGATAATTTGGGAGTGACAGTGGTTACTGCTGCATTAAGCTTCTTGGCTAATTTTGAGGATGTGTATAAACTATGGACTTTTGTTGCTAGGTTTCTTGATGCAGATTTTGTGGAGAAGGAGAGGTGGAGATTTTCAGAGGAATCAGACACTGGTAATCTGAAGTTTAACTTCAACGTATCAGAAACTCTGCCTCTCTGCAAAAAAACACAgATGGAAGTGAATCCTGACGGCGGTTCTGGTTTTAGCGAAGAAAACGGCACACTGAGCACCGATATGTCTCCGTCGGAGACGACGGAGGCGGCGGTAATGAAAGAAGAGTTGACGGAAACTGATAATCACAACCGTCAAGAATCGCTTGCGGTGGGTGTTGTTCCGATGCCGGTGACAATGGCAGTGCAGAAGCCGAAGAGACAATCAAAAGACCGTCACACGAAGGTGGAGGGACGTGGTCGGAGAATCAGAATGCCGGCAGCCTGTGCGGCGAGGATCTTTCAGCTGACACGGGAGCTTGGTCACAAGTCTGATGGAGAAACAATACGGTGGTTGCTTGAACAAGCTGAACCTGCGATCATTGAAGCCACCGGCACTGGAACTGTCCCTGCCATCGCTGTTTCAGTCGGTGGAACGCTAAAGATTCCAACAACATCGGCGGCGAGACCCGACGGTGAAGATACACCAAGGAAACGAAGGAGAAGAGCATCAAACAGTGAATTTGTTGATGTGAATGATCAAGTTTCAATGTGTTCTGGGTTAGCACCAATAGCTCAAACACCATACGGTGGTGCCACCGTCAACGGTGGTGaaaatggtggtggtggtttggTTCCTTTGTGGCCTGTGGTGAGTAATGGTGTGACTAATCAAACAGGGCCATTTTTCATGTTCCCAAATTCAACTATGAATCAACCACAGTTTTGGGCTATTCCTGCAGCACCTTTTTTCAATATGCAACAAAATAGACCCATTTCTGATTATGTTTCTGCTATGCAAATgcaacaaaatcatcaacaacaaccttCAAATGCTTCTGCTAATGCTAATTCTTCGTCTACTTTGGTTCCTTGTTTGAACTCAGCAACATCAACAACTTGTTCTGCTGCTTCATCATCTTCTGCAGGAACTCCACAAATGCTTAGGGATTTCTCTTTGGAAATATTTGACAAGAAAGAGTTACAGTTTATGGGTTGTTCTTCTGCAAATTTAGGATCACCTCCTACTTCAAACCCTTCAAATTGA 2946 0.369 MHSSLNKKEVTKVCPQGCCPTLLFINSSQQSLNNTTKPRNSSSQCRQIFATTTSTSIFPNTKFTNHESLPSLHESFTEFMKVYPQFSETEKIDSLRAKEYYHLSFLNQSCLDYIGIGLFSYYQRQQHDVSKTHLSSSSPSTSTPFQSPQQYSDIPFFSISYKTGNLKTLLLHGGKESEFESAMRRRIMKFLNISENDYFMVFTANRTSAFKLVADSYPFQSCKKLLTVYDYESEAVEAMISSSEKRGAKSMSAEFSWPRLRIQSTKLKKMIVSDNSNKKKKKTKSGLFVFPLHSRVTGARYPYLWMRTAQENGWHVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSSISILEPSTCAGIVNLVPESRLFNLSEDSSSNNQVKVDQKSPTILQEQELSSMSSFSGRMQTPQFVKVEGVQSEEIKAPQGCETVEENRVFEKIQIKNVQDSKNGSFEIECRCLDQVDSLGLTKVTNRGRYLINWLVNSLMKLKHPNDEGVSLVKIYGPKIRFDRGPALAFNVYDWKDKYSEEKGRVLQSKEGRGEKVTANKKKDRDNLGVTVVTAALSFLANFEDVYKLWTFVARFLDADFVEKERWRFSEESDTGNLKFNFNVSETLPLCKKTQMEVNPDGGSGFSEENGTLSTDMSPSETTEAAVMKEELTETDNHNRQESLAVGVVPMPVTMAVQKPKRQSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSAARPDGEDTPRKRRRRASNSEFVDVNDQVSMCSGLAPIAQTPYGGATVNGGENGGGGLVPLWPVVSNGVTNQTGPFFMFPNSTMNQPQFWAIPAAPFFNMQQNRPISDYVSAMQMQQNHQQQPSNASANANSSSTLVPCLNSATSTTCSAASSSSAGTPQMLRDFSLEIFDKKELQFMGCSSANLGSPPTSNPSN 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04481 981 MobiDBLite consensus disorder prediction 650 664 - -
Tsu01g04481 981 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 542 615 - -
Tsu01g04481 981 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 11 541 - -
Tsu01g04481 981 MobiDBLite consensus disorder prediction 642 664 - -
Tsu01g04481 981 MobiDBLite consensus disorder prediction 782 806 - -
Tsu01g04481 981 Gene3D - 170 397 IPR015421 GO:0003824
Tsu01g04481 981 PANTHER MOLYBDENUM COFACTOR SULFURASE 542 615 - -
Tsu01g04481 981 PANTHER MOLYBDENUM COFACTOR SULFURASE 11 541 - -
Tsu01g04481 981 MobiDBLite consensus disorder prediction 791 806 - -
Tsu01g04481 981 ProSiteProfiles TCP domain profile. 709 763 IPR017887 -
Tsu01g04481 981 Pfam TCP family transcription factor 708 781 IPR017887 -
Tsu01g04481 981 SUPERFAMILY PLP-dependent transferases 181 378 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04481 Tsu-Chr1 52466176 52477907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04481 705 964 TCP Transcription Factor Family AT5G51910 52.399 1.42e-67 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu01g04481 TCP 4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04481 - - gmx:100820534 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04481 01 52466176 52477907 Tsu01g04481 01 52466176 52477907 ECH