Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04439 ATGGCGTTGGGTGCACCTGCTGTTCCGTTCACTTACGTTGCTCACGTTCTTGGTGTTACCGCAATCGTATTGGTCTTCGTTTGGAACATACATTTCAGAGGTGGTTTAGCTTGGAGTTCTGACAACAAAGCTCTCATCTTCAATCTTCATCCTGTTCTTATGCTTACTGGCTTAATAGTACTTGGAGGTGAAGCCATTATAAGTTACAAATCTCTTCCACTGAAGAAGGAAGTGAAGAAATTAATACACCTTATTCTCCACGCGCATGCATTAGTACTTGGAATAGTTGGAATTGCTGCTGCGTTCAAGAATCACAATGAAAGTGGGATTGCCAATCTGTACAGCTTGCATTCATGGCTTGGAATTGGTGTTATTTCCCTTTATGGCATTCAGTGGATATTTGGGTTTGTGGTATTTTTCTACCCTGGTGGGAGTTCAGAGTTAAGACGCGAATCAGTTCCATGGCATGTACTATTTGGGCTGTTTGTGTATATTTTGGCTCTTGCCACTTCTTCTCTTGGGTTTCTGGAAAAACTCACATTCCTGGAGAGTTCAGGAGTGGCAAAATATGGTTCTGAAGCTTTACTTGTGAACTTCAATGCTATAATCACAATCCTGTTTGGTACCTTTGTTGTATTATCTGCCATATCTCAAGCTCCACCAGCTGCTGATGACTACGCACCCATATAG 690 0.4203 MALGAPAVPFTYVAHVLGVTAIVLVFVWNIHFRGGLAWSSDNKALIFNLHPVLMLTGLIVLGGEAIISYKSLPLKKEVKKLIHLILHAHALVLGIVGIAAAFKNHNESGIANLYSLHSWLGIGVISLYGIQWIFGFVVFFYPGGSSELRRESVPWHVLFGLFVYILALATSSLGFLEKLTFLESSGVAKYGSEALLVNFNAIITILFGTFVVLSAISQAPPAADDYAPI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04439 229 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Tsu01g04439 229 Gene3D - 4 224 - -
Tsu01g04439 229 CDD Cyt_b561_ACYB-1_like 40 183 - -
Tsu01g04439 229 PANTHER CYTOCHROME B561-RELATED 1 225 IPR043205 GO:0016491
Tsu01g04439 229 SMART 561_7 49 175 IPR006593 -
Tsu01g04439 229 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Tsu01g04439 229 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04439 Tsu-Chr1 52104100 52108544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04439 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 69.266 4.60e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04439 K08360 - gmx:100306179 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04439 01 52104100 52108544 Tsu01g04439 01 52104100 52108544 ECH