Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04403 ATGGCTCCTAAGCAACCAAGTACGGGTCTTTTCGTTGGACTGAACAAGGGTCACGTTGTTACAAAGAAGGAATTGGCTCCTCGTCCTTCAGCTCGCAAGGGGAAAACTAGCAAGAGGGTTCACTTTGTGAGGAATCTCATTAGAGAGGTTGCTGGTTTTGCACCTTACGAGAAGCGTATCACTGAGTTGCTCAAGGTTGGTAAAGATAAGAGGGCTTTGAAGGTAGCAAAGAGAAAGCTCGGAACACACAAGCGTgcaaagaagaagagagaggagATGTCTAATGTTCTCAGGAAGATGAGGGCTGGTGGAGCAGGAGACAAAAAGAAATAG 333 0.4354 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSARKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04403 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Tsu01g04403 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Tsu01g04403 110 MobiDBLite consensus disorder prediction 87 110 - -
Tsu01g04403 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Tsu01g04403 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Tsu01g04403 110 MobiDBLite consensus disorder prediction 79 110 - -
Tsu01g04403 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04403 Tsu-Chr1 51837991 51839850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04403 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.909 1.10e-58 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04403 01 51837991 51839850 Tsu01g04403 01 51837991 51839850 ECH