Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04380 atggaaacacaaaaccTTATCCTTTTAATCCTTCTGTTTTTTCTACCTTGTTCACTTTCCTTTGTTCCTATAGACAACTACTTAATTAACTGTGGATCACACAGCAATGTTTCTCAATTCAATAGAGTTTTCATTAGTGATTCTATCAAACCAGGTTCAAATTTTCTCTCTTCAGATGATTCCATTTCTCTCACAGACAAAAACCCATCTCAGAATTTGCAAACTTTGTATCTGACAGCTAGAGTTTTCATTTCCACTGGAAGATACAGGTTCAGCATGAAGAAAAATGGTACCCACTTGGTTCGTTTTCACTTTTTTCCCTTTAAAGCTCAAAGTTTTGACTTGAAATCTGCAAAATTTAGTGTCTTGGTTAATGGAATTCCAATTTTAAGTGAGTTTAGGCCATCTAATGATGTGGTTCTCAAAGAGTTTATTTTGAAGATTGAATCAAATTTGCTTGAAATTTTGTTTAGACCCTTTAAATCAGGTTTTGGATTTGTCAATGCTGTTGAAGTGTTTACTGCTCCTGAAgattttgttatagattatggAACAAGGTTGGTTGGTCCTTCTGGTGTGGAAGAGTACAAAAATCTTTCATCTCAGGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTATGAAAATAACTCCTTTCAATGATACCCTTTGGAGGACTTGGATGCCTGATGaggattttttggtttttaaggAAGCAGCTAAACATGCAGTAAGCACTGATATACCTAATTATCAAAAAGGAGGTGCAACTCGAGAGATCGCGCCTGAGAATGTTTACATGACTGCTCAGCAGATGAATAGGGAAAACTCAAGCTTAGCTTCAAGATTCAACATAACATGGAATTTTCCTGTGGCTCGTGACGGCGTTTTGCACTTGATTCGGTTACATTTTTGTGATATTGTTAGTCCTTCTCTTAATTTGCTTTACTTTGATGTGTATATTAATGGATACATTGCATATAAGGATCTTGATTTGTCAGCACTTACATTCCACACTCTTGCATCACCAGTCTATGTGGATTTTGTTGTTAATTCAGACAAATCTGGTGTTATTCAAATAAGCGTTGGTCCTTCTGACCTGAGTAGTTCTATAAGGATTAATGCCATATTGAATGGTGCTGAGATAATGAAGATGGTCAAAGATGTCGATAATACTAAGACTGTGCACAGAAGGAAGCAATTGTGGGAGTTGCTGTGTTTAATTGTTGGAGGAATTGTTGTCTTGTTTATTGCTGTAACTGTTTTTCTACTTGCTACCAAATGCAGGAAGAGGGAATCAAAAGAAAGTACAGCGGAAAGTGTCGGATGGACGCCTTTGCGTATGTTCGGAGGGAGTTCCCTTAGTAGAACATCTGAACATGGTTCTTATGGATATCTTGGAATGAAGATCCCTTTTGCTGATGTACAATCAGCAACAAACAATTTTGATAGAAATTTGATTATAGGTTCTGGTGGATTTGGTATGGTCTACAAAGGAGTACTTAGAGACAATGTGAAGGTTGCTGTCAAGAGAGGTATGCCTGGTTCAAGACAAGGCCTTCCAGAATTCCACACTGAAATAAGTGTTTTATCCAAAATCCGTCATCGTCATCTTGTTTCACTAGTCGGTTTCTGTGAAGAAAATTCGGAAATGATACTTGTCTATGAGTATGTAGAAAAGGGTCCACTTAAAAAGCATTTATATGGTTCGTCGCGACAATCACCTCTCAATTGGAAGCAGCGGCTTGAGATATGCATTGGTGCGGCTAGAGGTCTACACTATCTTCACACCGGTTTTGCTCAAGGAATCATCCACCGCGACATTAAATCGACCAACATATTGATTGATGAAGATTATGTGGCAAAGGTTGCTGATTTCGGTCTTTCGAGATCTGGGCCGTGCATCAATGAAACACATGTGAGTACCGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCCGAGTATTATCGGAGGCAACAGCTTACTGATAAATCAGATGTGTATTCGTTCGGAGTAGTGCTTTTTGAGGTTCTTTGTGGAAGACCTGCTGTTGATCCACAACTGACTAGAGAACAGGTGAATTTAGCAGAATGGGCAATTGAATGGCTGCAGAAGGGAATGCTGGACCATATTGTTGATCCTAATCTTGTTGGCGACATTAAACCAAGATCATTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATATGGTGTCGATAGACCAACTATGGGTGATGTTTTGTGGAATTTGGAATATGcacttcagctccaagaaagtGCTACCAGTGCTAGTGAAGCAGTTAATGAAACAACAACAAGTAGTCCTGAACATTCAAGAAGATTAGAGAGAAATTATGATAATGATTATTCAGACATTAGTACTAGCCGAGTGTTTTCCCAGCTAATGAATAACGAAGGCAGGTGA 2436 0.3723 METQNLILLILLFFLPCSLSFVPIDNYLINCGSHSNVSQFNRVFISDSIKPGSNFLSSDDSISLTDKNPSQNLQTLYLTARVFISTGRYRFSMKKNGTHLVRFHFFPFKAQSFDLKSAKFSVLVNGIPILSEFRPSNDVVLKEFILKIESNLLEILFRPFKSGFGFVNAVEVFTAPEDFVIDYGTRLVGPSGVEEYKNLSSQVLETIHRINVGGMKITPFNDTLWRTWMPDEDFLVFKEAAKHAVSTDIPNYQKGGATREIAPENVYMTAQQMNRENSSLASRFNITWNFPVARDGVLHLIRLHFCDIVSPSLNLLYFDVYINGYIAYKDLDLSALTFHTLASPVYVDFVVNSDKSGVIQISVGPSDLSSSIRINAILNGAEIMKMVKDVDNTKTVHRRKQLWELLCLIVGGIVVLFIAVTVFLLATKCRKRESKESTAESVGWTPLRMFGGSSLSRTSEHGSYGYLGMKIPFADVQSATNNFDRNLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFHTEISVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSRQSPLNWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILIDEDYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWAIEWLQKGMLDHIVDPNLVGDIKPRSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYALQLQESATSASEAVNETTTSSPEHSRRLERNYDNDYSDISTSRVFSQLMNNEGR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04380 811 Pfam Malectin-like domain 29 386 IPR024788 -
Tsu01g04380 811 Pfam Protein tyrosine and serine/threonine kinase 488 683 IPR001245 GO:0004672|GO:0006468
Tsu01g04380 811 Gene3D Transferase(Phosphotransferase) domain 1 559 781 - -
Tsu01g04380 811 MobiDBLite consensus disorder prediction 765 790 - -
Tsu01g04380 811 Gene3D Phosphorylase Kinase; domain 1 454 558 - -
Tsu01g04380 811 SUPERFAMILY Protein kinase-like (PK-like) 468 752 IPR011009 -
Tsu01g04380 811 PANTHER OS07G0166700 PROTEIN 15 779 IPR045272 GO:0004714|GO:0006468
Tsu01g04380 811 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g04380 811 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 779 - -
Tsu01g04380 811 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Tsu01g04380 811 SMART serkin_6 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g04380 811 CDD STKc_IRAK 489 755 - -
Tsu01g04380 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Tsu01g04380 811 Gene3D - 203 389 - -
Tsu01g04380 811 Gene3D - 26 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04380 Tsu-Chr1 51628465 51631029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04380 2 811 Receptor kinase-like Gene Family AT3G46290 48.100 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu01g04380 Malectin_like 3.2e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04380 - - gmx:100801169 1311.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04380 01 51628465 51631029 Tsu01g04380 01 51628465 51631029 ECH
Tsu06g02927 06 38516788 38520603 Tsu01g04380 01 51628465 51631029 PCT