Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04351 ATGGCTTCTTCATTATTGTGTTGTTGGGTTATTGTTGTTACTATGTTCCTAGGTTGTTTTTGTAGTTGCATTTCAAGTGAGATTGGGTTAGGGTCAAGATTATTGGCTAGTAAAGACCAAGTTTGGGTTTCTGATAATGGTACATTTGCTATGGGATTCACTCCATCAAACACTGATAATCATTTGTTCACTTTGGGTATTTGGTTTGCTAGGCTTCCAGGAGATAGAACTTTTGTTTGGTCACCTAATAGAAACTCTCCTACATCACAGGAAGCAATTTTGGAGCTTGACACCACAGGAAACCTCATTCTCatggacaaaaaaatcaccATATGGACCTCAAACACATCAAATGAAAATGTAGAATCAGCAACCATGTCAGAATCAGGAAACTTCATCCTTCACAACATAAACAATCATCCTATATGGCAGAGTTTTTCTCAACCTTCTGACACACTCCTTCCAAATCAGCCTCTAACAGTTTCTTCAGAACTAACATCAGCAAAATCTTCTTCTCATGGTGGCTACTATACTCTCAAAATGCTTCAACAACCAACTTCCTTAAGTCTTGCACTAACTTACAATCTTCCAGAAACTTATCAATCTTTGTATGAAAATGAATCATCATACACCAACTATTCCTATTGGCAAGGTCCTGAGATTTCGAATGTAACCGGTGAAGTTATTGCGGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTATATGGAGATTCATCTGATGGCGCGGTTTATGTTTATAagaatgataatgatgatgctGGTTTAGCTTCAGCAATTCATCAATCTACACCGTTAACCGTTCTTAGGAGACTAACACTCGAAGAGAATGGAAACTTGCGGTTGTATCGATGGGAAGACGTAAATGGATCGAAACAATGGGTGTCACAATGGGCTGCAGTTTCAAATCCATGTGATATTGGTGGAATTTGTGGTAATGGAGTTTGTAAATTGGATAGAACTAAGACAAATGCATCTTGTACTTGTTTACCAGGAACTTCTAAAGTTGGTAGAGATGGACAATGTTATGAGAATTCATCTCTTGTTGGAAAATGTActaatggaaaaaatgaaaacaagtcATCACAGTTTAAGATTTCAATGGTTCAACaaactaattattatttttcggAATCTTCAATAATAGCTAATTATAGTGAGAATGATGTTTCTTCTGTATCAAAATGTGGTGATGCATGTTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGACTAAATGAAGAGAGACCATTTTGTTGGGTTTTGAGGAGTTTAAGTTTCGGCGGTTTTGAAGATACGAGTTCGACTTTGTTTGTGAAAGTTAGACCAAATAGTTCATGGACACCAGAAGGAAAGTCTAATAGTTCTTCTGATGGAATGGGGAGTGCTAAGGAGAAGGCTGTGATTATTCCAATTGTTTTAGGAATGATAGCTCTCATTATTTTGCTATGTATGTTACTTTATTACAGTGTTCACAGAAAAAGAACTTTGAAAAGAGAAATGGAAAGTTCATTGGCCTTAACAGGTGCTCCAATGAATTTTACTTACCGTGCTTTGCAAATCAGGACGAGCAACTTTTCGCAACTATTAGGAACAGGTGGATTTGGAAGTGTGTATAAAGGAAGCCTAGGAGATGGTACCCTAGTGGCAGTGAAAAAACTTGATAAGATTTTGCCTCAtggagaaaaagaatttatcaCTGAAGTAAACACAATAGGATCAATGCATCATATGAATTTGGTTCGTCTATGCGGCTTCTGTTCCGAAGGACCACACAGGCTTTTGGTTTATGAGTACATGAAGAATGGTTCATTGGATAAATGGATCTTCCCTTCGTATCGAGGGCGAGATAGAATACTAGATTGGCAAACTCGCTTGGATATCGCCATAAATACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGAAATAGGATCATACATTGTGACATCAAACCagaaaatattttgttagaTGAAAACTTTTGTCCTAAAGTATCTGATTTTGGACTTGCCAAATTGATGGCAAGGGAACACTCTCATGTAGTAACAATGGTAAGAGGCACTAGAGGTTATTTGGCACCAGAATGGATTAGTAATCGACCTATAACGGTAAAAGCAGATGTTTACAGCTACGGTATGCTTCTTTTAGAAATCATTGGCGGCAGGAGAAATCTTGACTTATCCTTTGATGCAGAAGATTTCTTCTATCCTGGTTGGGCTTATAAGGAGATGACAAATGGCTCAACAATCAAAGTGGCAGATAGAAGATTAAATGGTGCAGTTGATGAAGAAGAGCTAACTAGAGCTTTGAAAATTGCCTTTTGGTGCATACAAGATGATGTTTCAATGAGACCACCAATGGGAGAAGTGGTGAGAATGCTTGAAGATCAAGATTCAAATagcataaatataaatatgccaCCAATGCCACAAACAGTACTAGAGGTAATTGAAGAAGGGTTGGATCATGTCTACAAAGCTATGAAAAGAGAGTATAACCATTATAGCTCATTCACCATTACAAGTCATCTTACATCTCATGCCACATGTAGCAACTCCACAATGTCACCAAGATAG 2604 0.361 MASSLLCCWVIVVTMFLGCFCSCISSEIGLGSRLLASKDQVWVSDNGTFAMGFTPSNTDNHLFTLGIWFARLPGDRTFVWSPNRNSPTSQEAILELDTTGNLILMDKKITIWTSNTSNENVESATMSESGNFILHNINNHPIWQSFSQPSDTLLPNQPLTVSSELTSAKSSSHGGYYTLKMLQQPTSLSLALTYNLPETYQSLYENESSYTNYSYWQGPEISNVTGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDNDDAGLASAIHQSTPLTVLRRLTLEENGNLRLYRWEDVNGSKQWVSQWAAVSNPCDIGGICGNGVCKLDRTKTNASCTCLPGTSKVGRDGQCYENSSLVGKCTNGKNENKSSQFKISMVQQTNYYFSESSIIANYSENDVSSVSKCGDACLSDCDCVASVYGLNEERPFCWVLRSLSFGGFEDTSSTLFVKVRPNSSWTPEGKSNSSSDGMGSAKEKAVIIPIVLGMIALIILLCMLLYYSVHRKRTLKREMESSLALTGAPMNFTYRALQIRTSNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDKILPHGEKEFITEVNTIGSMHHMNLVRLCGFCSEGPHRLLVYEYMKNGSLDKWIFPSYRGRDRILDWQTRLDIAINTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMAREHSHVVTMVRGTRGYLAPEWISNRPITVKADVYSYGMLLLEIIGGRRNLDLSFDAEDFFYPGWAYKEMTNGSTIKVADRRLNGAVDEEELTRALKIAFWCIQDDVSMRPPMGEVVRMLEDQDSNSININMPPMPQTVLEVIEEGLDHVYKAMKREYNHYSSFTITSHLTSHATCSNSTMSPR 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04351 867 Pfam D-mannose binding lectin 77 164 IPR001480 -
Tsu01g04351 867 PANTHER OS07G0415500 PROTEIN 6 867 - -
Tsu01g04351 867 CDD STKc_IRAK 537 804 - -
Tsu01g04351 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Tsu01g04351 867 ProSiteProfiles Protein kinase domain profile. 531 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g04351 867 Gene3D Phosphorylase Kinase; domain 1 495 606 - -
Tsu01g04351 867 Pfam Protein kinase domain 534 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g04351 867 Pfam S-locus glycoprotein domain 258 339 IPR000858 GO:0048544
Tsu01g04351 867 CDD B_lectin 37 149 IPR001480 -
Tsu01g04351 867 SMART blect_4 33 149 IPR001480 -
Tsu01g04351 867 ProSitePatterns Protein kinases ATP-binding region signature. 537 560 IPR017441 GO:0005524
Tsu01g04351 867 Gene3D Transferase(Phosphotransferase) domain 1 607 816 - -
Tsu01g04351 867 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 6 867 - -
Tsu01g04351 867 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Tsu01g04351 867 SUPERFAMILY Protein kinase-like (PK-like) 510 804 IPR011009 -
Tsu01g04351 867 PIRSF SRK 1 857 IPR024171 GO:0004674
Tsu01g04351 867 SMART serkin_6 531 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g04351 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 181 IPR036426 -
Tsu01g04351 867 Gene3D - 25 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04351 Tsu-Chr1 51445395 51449317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04351 483 817 Receptor kinase-like Gene Family AT5G20050 42.340 4.16e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu01g04351 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04351 - - gmx:100794281 1489.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04351 01 51445395 51449317 Tsu01g04351 01 51445395 51449317 ECH