Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04310 atggcATCTAATAATTCATCCATGAACCAAACAAAATTTGTACATCAAAATAGTACTAACAATGAACAAAATGCAACACTAGAGattgaaaataatgaatttgATTACTCAAAAAGATCACAATGGCTTCGCGCCGCGGTTTTAGGAGCTAATGATGGATTAGTTTCAACAGCATCACTAATGATGGGTGTAGGAGCAGTAAAACAAGACATCAAAGCGATGATCTTGTCGGGTTTTGCTGGACTTGTCGCCGGTGCTTGTAGCATGGCAATAGGTGAGTTTGTTTCGGTTTATTCGCAACTTGACATTGAAATTGCacaattaaaaagagaaaaaaatattgaaagaggTGATaatattgaagaagaagatgttaTTGAGAAAGAAAGTTTGCCGAATCCTTTACAAGCAGCAGCAGCTTCAGCTTTAGCATTTTCAATAGGTGCAATTGTGCCACTTCTTGCAGCATCTTTTATTAAAGGTTATAAGGTAAGGGTAGGTGTTGTTTTGGGAGCAGTTAGTTTTGCTTTGGTTGTGTTTGGTTGGTTAGGAGCAGTGTTGGGTAAGGCTCCAATTTTAAAGTCATGTTTGAGGGTCTTGCTTGGAGGTTGGGTTGCTATGGCTATTACTTTTGGACTAACCAAGTTGATTGGGTCAAGTGGGCTTTAG 669 0.3558 MASNNSSMNQTKFVHQNSTNNEQNATLEIENNEFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQLKREKNIERGDNIEEEDVIEKESLPNPLQAAAASALAFSIGAIVPLLAASFIKGYKVRVGVVLGAVSFALVVFGWLGAVLGKAPILKSCLRVLLGGWVAMAITFGLTKLIGSSGL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04310 222 MobiDBLite consensus disorder prediction 1 22 - -
Tsu01g04310 222 Pfam VIT family 43 123 IPR008217 GO:0005384|GO:0030026
Tsu01g04310 222 Pfam VIT family 122 214 IPR008217 GO:0005384|GO:0030026
Tsu01g04310 222 CDD Nodulin-21 41 191 - -
Tsu01g04310 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 6 219 IPR008217 GO:0005384|GO:0030026
Tsu01g04310 222 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 6 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04310 Tsu-Chr1 50902298 50903281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04310 20 222 Nodulin-like Gene Family AT3G43660 68.932 2.21e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04310 K22736 - gmx:100814343 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g02719 06 35111270 35112351 Tsu01g04310 01 50902298 50903281 PCT