Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04253 ATGGCCATGGACATGCATTCTCACATAGACAGAATCCTTTGGACCGAAGACCAAATCTCTCTTCGAATCTCCCAACTCGCCGCTCAAATCGTTCAAGACTTTCCTGCTCCTTCATCTCCTCCCGTTTTTGTCGGCGTTCTTACTGGCGCATCCATCTTCCTCGCTGACCTAGTTCGTAAAATTAACCTCCCCATTACTATTGATTTTGTTAGTTCTAAATCCTATGGTTCCGGAACCGTCTCTAATTGCGCTCCCACCATTTCTCGTGACTTGAATGTTGACGTTAATGGCCGCCACGTCATATTGGTCGAAGACATTGTAGACACAGGACATACTTTATATAAACTCATTGGGCACATGAAATCAAAAGGAGCATCCTCTGTGTCCGTATGTACTCTACTAGACAAACCAGCAAGGAGGAAAGTTGATGTACAGTTGGTGGGTGAAGGAAAATTCTACCAGGGATTCGAGTGTCCAGACAATTTTGTTGTTGGTTATGGAATGGATTTTGACGAATTATACAGAAATCTACCTTATATTGGTGTCTTGAAACCTGAACATTACAGTTGA 570 0.4298 MAMDMHSHIDRILWTEDQISLRISQLAAQIVQDFPAPSSPPVFVGVLTGASIFLADLVRKINLPITIDFVSSKSYGSGTVSNCAPTISRDLNVDVNGRHVILVEDIVDTGHTLYKLIGHMKSKGASSVSVCTLLDKPARRKVDVQLVGEGKFYQGFECPDNFVVGYGMDFDELYRNLPYIGVLKPEHYS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04253 189 TIGRFAM HGPRTase: hypoxanthine phosphoribosyltransferase 12 184 IPR005904 GO:0004422|GO:0006166
Tsu01g04253 189 CDD PRTases_typeI 23 141 IPR000836 -
Tsu01g04253 189 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 5 188 - -
Tsu01g04253 189 SUPERFAMILY PRTase-like 2 188 IPR029057 -
Tsu01g04253 189 Pfam Phosphoribosyl transferase domain 21 170 IPR000836 -
Tsu01g04253 189 PANTHER HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE 5 188 - -
Tsu01g04253 189 Gene3D - 2 189 IPR029057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04253 3 188 PRT Gene Family AT1G71750 60.406 8.40e-83 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04253 K00760 - gmx:100797406 281.952