Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04241 ATGCATGAGTACACCATGGATGAAGAAGAGCTTAAGAGATGCGATGATGTTAAGGACTATTATGCACTTTACAAGGTGTTCAAGAAAAGTGGACCTGGTCCTAAGAATGGCGAACAGTATGGCGCACCATTTAAAGAAGAAGACTGGGCAGATGACAATGTTGTAGATTTTAATGTTAAATCAGCTCAGCTGGAGGCTCCAAAGGCTGTTACTAACACTTTTACTGATCAGCCACAGCCGTTGCCTGTTGTTAACGCTTTTTCCAATCAGCTGCAGCcgttgtttgatgatgaaattgatGAAATCTTTAAAGGGGCTTTTGATATTCAGCCTGTCCTTGACCAACAACATGTTAATGGTTATGCCAACTTTCCTCAGGTTGTTGCCGGAGAAACACAAAGTATGGTCATGGGTCAATTCTCTGAGGCCATGATATTCCCTGAGCGAAGTGGGAAATTGCAATCTAGCGGTCAACATTATGATGCAGAGCTCGACTTTGACTTCAATCACTCAGCTACTTCTCAGTTGCATATAACTGAAGCACCTGAGGTCACTTCTGCTCCCAACATTCAAAGTGATGAGGGGCTTGTCTTTTACGAGGACGGTTTCTTGGAAATTAATGATCTAACGGATACTGAACCAGCATTTTCAAATACAGAAAAGTTTAACATCGATCTCATTGATAACCTCCAGTTTGAAGATGGGTTAAGTGAATTTGATCTGTACCAAGATGCAGAGATGTTTCTTTGTGGCAATGAAACTGTTTCACATGCACATATGAACAATTTTGGCAGCACTATTGAAAACCAGAGTTACCAGTTGCTGTCCAATCCAGAAGCCGTCAATCAAACtgttgatgaattctggatGAATGTCGAAAGAAACACACGGAGTACAACAGAAGACTACACTGGTTCTTTCTCTCAGACAAATCCAGGTATAGACACAAGATACAATGTCGCACAAGTGCCAAATAATGATTTtactttctttgatttcgatgGAGATTCAAGCTTCCCATCTCATTTCCGCTGA 1035 0.3923 MHEYTMDEEELKRCDDVKDYYALYKVFKKSGPGPKNGEQYGAPFKEEDWADDNVVDFNVKSAQLEAPKAVTNTFTDQPQPLPVVNAFSNQLQPLFDDEIDEIFKGAFDIQPVLDQQHVNGYANFPQVVAGETQSMVMGQFSEAMIFPERSGKLQSSGQHYDAELDFDFNHSATSQLHITEAPEVTSAPNIQSDEGLVFYEDGFLEINDLTDTEPAFSNTEKFNIDLIDNLQFEDGLSEFDLYQDAEMFLCGNETVSHAHMNNFGSTIENQSYQLLSNPEAVNQTVDEFWMNVERNTRSTTEDYTGSFSQTNPGIDTRYNVAQVPNNDFTFFDFDGDSSFPSHFR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04241 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 327 - -
Tsu01g04241 344 PANTHER NAC TRANSCRIPTION FACTORS 2 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04241 Tsu-Chr1 50251259 50255973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04241 1 275 NAC Transcription Factor Family AT1G34180 32.616 9.22e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04241 - - mtr:MTR_1g097300 452.595