Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04237 ATGGAGATTCACTTCTTTATATTATTTGCCACTCTATCATTAATCATAATCCGGTTCTTTCTAAACCGCAAAAGAAACAAACCACCCGGTCCAACCGGTCTACCAATAATCGGAAACCTCCATCAACTAGGCTCCAAACCTCACTGTACCCTCTCTTCCCTCGCCAAAACCTATGGCCCCATCATGTCCCTCCGTTTCGGCTCCGTCACTGTAACCGTCGCCTCCTCCCCTACAACCGCCCAAGAAATCCTCCAAAAAAACGACCAATCCTTCACTAACCGCCCTATCCCTGAATCAGTCGCCGCTCAACCAAATGTCAACGACACACTCGCATGGGCACCGGCCGACTCACGGTGGCGCAACCGTCGCCGTATATGCACAACTCAAATATTCACATCTCAACGCCTTGACCTCCTCCAACATCTCCGTCACCGGAAAGTTGAGGAACTAGTTCAACACCTTCATAAAAAAGCTGCTAAAAAAATAACAGTTGATATAGGTGAACTTGCTTTCGCTACCATGTTGAACTTGGTTTCTAACACGGTGTTTTCTGAGGATCTTGTTGACTCAGAATTTGAAAGTGCTGGTGAGTTTAAGGAGCTTGTCTGGAGAATTATGGAAGATGCAGGGAAAGTGAATGTTAGTGATTATTTTCCTGTGTTGAAGAGATTTGATTTGCAAGGTGTGAAGAGACATGTTAAGGTTTCTTATGAGAGATTGCATGagatttttgataaaatgattAAGAAACGTGTTGAAGATAGAGATAATTTGAagggtgatggtggtggtgatttTTTGGATGTGTTGCTTGATCACTGCCAACAAGATAAAGACTCTGTTTTTAGTGTTGAAAGCATCAAGCCATTGATTCTGGATTTATTTATAGCTGGAAGTGACACATCAGGATCAACAACAGAATGGGCAATGGCAGAGCTTCTTCACAAtccaaaaataatgaaaaaagcAAGAAGTGAAGTGATTCAAGTAATTGGCAAATTCAACCAAGTCAAAGAATCAGACATTCCAAAACTTCCTTACATCCAATCAATAGTCAAAGAAACTCTTAGACTACATCCACCAGTACCTCTTCTCTTACCTTATATTGCATCAAATGATGTTGAAATCAATGGTTACACAATTCACAAAGGAAACCAGGTTTTGATAAATGCATGGTCTATTGGAAGAAACCCTGAGTTTTGGGATGATCCATTGTTGTTTCGGCCCGAAAGGTTTCTCGATTCTAAGGTTGATTTTAAAGGGAGGGATTTCGAGTATTTACCATTTGGTGCTGGAAGGAGAATTTGTCCTGGTATTCCATTGGCTAATAGGATGATCGTTTTAATGTTGGCCGGATTGTTACATTCTTTTGAATGGGAGCTTCCTCAAGGTGTTACTCCAGAAATGCTTGATATGAGGGAGCAATATGGAATCACCTTGAAGAAACTTGTCCCTCTTTCTGCTATTCCAATTTCAGTAGTAGTATGA 1488 0.3992 MEIHFFILFATLSLIIIRFFLNRKRNKPPGPTGLPIIGNLHQLGSKPHCTLSSLAKTYGPIMSLRFGSVTVTVASSPTTAQEILQKNDQSFTNRPIPESVAAQPNVNDTLAWAPADSRWRNRRRICTTQIFTSQRLDLLQHLRHRKVEELVQHLHKKAAKKITVDIGELAFATMLNLVSNTVFSEDLVDSEFESAGEFKELVWRIMEDAGKVNVSDYFPVLKRFDLQGVKRHVKVSYERLHEIFDKMIKKRVEDRDNLKGDGGGDFLDVLLDHCQQDKDSVFSVESIKPLILDLFIAGSDTSGSTTEWAMAELLHNPKIMKKARSEVIQVIGKFNQVKESDIPKLPYIQSIVKETLRLHPPVPLLLPYIASNDVEINGYTIHKGNQVLINAWSIGRNPEFWDDPLLFRPERFLDSKVDFKGRDFEYLPFGAGRRICPGIPLANRMIVLMLAGLLHSFEWELPQGVTPEMLDMREQYGITLKKLVPLSAIPISVVV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04237 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Tsu01g04237 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 491 - -
Tsu01g04237 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 491 - -
Tsu01g04237 495 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 Pfam Cytochrome P450 28 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 SUPERFAMILY Cytochrome P450 20 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04237 495 Gene3D Cytochrome P450 18 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04237 Tsu-Chr1 50228195 50233396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04237 5 491 Cytochrome P450 AT2G45550 43.775 1.12e-147 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04237 - - vra:106769993 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04237 01 50228195 50233396 Tsu01g04237 01 50228195 50233396 ECH