Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04208 atGGGAATTTCTTCACAACCTTCTTTTGATGCACTCACTTTGAAAGATGTTCTTCAAGGAAGTGATGAAGTAAACAACAATTCATCATATTTATGGAGCAAAGTTTTGAATGAACAAGCCAAGAAAAGGGTGAAAAgatcaagaagaattttcatgAAGAGAAGGATTGGTTCTAGAAGAGGTTCCTATGGAATTCAAAGACGTGTAAGAACATTAAAGAGACTTATACCAAATAGTGATCAATCTATTGGGTTAGATGGACTTTTTAGAGAGACAGCTAATTATATATTGTCTTTGGAAAATAGAGTGAGAGTTATGAAGGTTATGGTTGAGGTATTGAATGGGAGTGATTGA 354 0.322 MGISSQPSFDALTLKDVLQGSDEVNNNSSYLWSKVLNEQAKKRVKRSRRIFMKRRIGSRRGSYGIQRRVRTLKRLIPNSDQSIGLDGLFRETANYILSLENRVRVMKVMVEVLNGSD 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04208 117 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 12 115 IPR044660 GO:0006355
Tsu01g04208 117 CDD bHLH_AtIBH1_like 54 110 IPR044549 GO:0006355
Tsu01g04208 117 PANTHER TRANSCRIPTION FACTOR UPBEAT1 12 115 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04208 43 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 48.193 1.72e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04208 - - gmx:100794627 138.658