Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04202 ATGGACTGTCTCAACTTCGCATCTTCCACACCTTCTCGCTGCTCTGGGATGCTGGGAAAACAGTTGAATTCCCCTCTTCTCACTATTGATTCTGCACCAAATTTCTTCTCTTGCAAGGCTGATTTTGCTGCTGCATCTTCAAGTATTCAATCATCAAATATCAGATATTCTTGCAGATTTTCACCGAGTgttgcaaaagaaaaatggaCCTCAAATCATTCTACGAACCAATGGATATTGCGTTCTACAACACAGATAGAAAATATAATCACAAGTAATGAAGATCGGAGTATGTGGGAAGCATGTAGACAAGCTCTTTCTGCATTTAACTTCAGTGATGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGCCTGGTTCATTCACCTTATTGGGGAGAAGATCGTAAGAAAGAAGTTCCCAAATTCGAGACAGTAAATGGAATATTAGAATATCTAAGGAGTTTTAATCTTTCTGACGATGATCTTTCCAAGCTGCTCAAAAAATTCCCAGAAGTTCTTGGATGTAATTTAGAAGAAGAGTTGAAAGCAAATATAACAATCCTCAAGGAACAATGGAGTATCGAAGGAAAATCGCTTAGAAACCTTCTCCttagaaatccaaaagttttGGGTTATAATGTTGATTGTAAGGGAGATTGTATGGCACAATGCACTAGATGCTGGGTTCGATTCTAG 699 0.3662 MDCLNFASSTPSRCSGMLGKQLNSPLLTIDSAPNFFSCKADFAAASSSIQSSNIRYSCRFSPSVAKEKWTSNHSTNQWILRSTTQIENIITSNEDRSMWEACRQALSAFNFSDEEKDKILGKAFGLVHSPYWGEDRKKEVPKFETVNGILEYLRSFNLSDDDLSKLLKKFPEVLGCNLEEELKANITILKEQWSIEGKSLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04202 232 Pfam mTERF 150 214 IPR003690 GO:0003690|GO:0006355
Tsu01g04202 232 PANTHER CGI-12 PROTEIN-RELATED 15 231 IPR003690 GO:0003690|GO:0006355
Tsu01g04202 232 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 231 - -
Tsu01g04202 232 Gene3D Transcription termination factor 3, mitochondrial 73 228 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu01g04202 mTERF 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04202 - - gmx:100797265 363.229