Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04200 ATGAGATTTCAAGGAATATCAACATTGGTTGATGTTGGTGGTGGAAGTGGACAAAATCTCAAAATGATTATATCTAAATACCCATTAATTAAGGGAATTAATTTTGATCTTCCTCAGGTTATTGAAAATGCACCTCCACTTCCAGGAGATGAGCTGGTGGGACAGGAGGATCTTGCACGCCTTGAAGATCCACATGAGGGGaattattatctttttcttgAGGCACCCACCGTTGGTGCAATGGAGTCAAAGATCAGAAATGATCAGGCCAGACTATTCAATAGGAGAAGACTTCATCTGGAGGGTTCCTAG 312 0.4006 MRFQGISTLVDVGGGSGQNLKMIISKYPLIKGINFDLPQVIENAPPLPGDELVGQEDLARLEDPHEGNYYLFLEAPTVGAMESKIRNDQARLFNRRRLHLEGS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04200 103 Pfam O-methyltransferase domain 2 46 IPR001077 GO:0008171
Tsu01g04200 103 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 51 IPR029063 -
Tsu01g04200 103 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 3 61 - -
Tsu01g04200 103 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 103 IPR016461 GO:0008168
Tsu01g04200 103 Gene3D Vaccinia Virus protein VP39 2 55 IPR029063 -
Tsu01g04200 103 PANTHER O-METHYLTRANSFERASE 3 61 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04200 Tsu-Chr1 49850115 49853608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04200 3 54 Monolignol Biosynthesis Gene Families AT5G54160 69.231 1.52e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04200 - - gmx:100798347 102.064