Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04152 ATGCCGCCGGAACCATTGCCTTGGGATCGGAAGGACTTCTTCAAGGAGAGGAAGCACGATAGGTCGGAGTCGCTTGGGTCGGTGGCTAGATGGAGAGATTCTTCTCATCATAGAGACTTCAATAGATGGGGATCCGCTGATTTTCGCAGACCGCCGGGTCATGGTAAGCAGGGTGGTTGGCACATGTTTTCTGAAGAGCCTGGTCATGGTTATGGGGTTTCTCGGTCGGGTGACAAGATGTTGGAGGAAGATAGCCGGCCGTCAATTTCACGGGGTGATGGAAAATATGGCAGGAGTAGTAGGGACAACAGAGGAGGTCCCTTTGGCCAGAGAGATTGGAGAGGTCATTCTTGGGAGGCCACCAATGGCTCTCCAAATTTGTCTAGGAGACCACAAGATATGATTAATGACCAGAGGTCAGTTGATGATTCGCTAACATATTCCTCTCAACCACATTCTGATTTTGCAAACACTTGGGAACATCATCAATCGAAAGACCAGCATGATAAGATGGGTGGTGTTAATGGGTTTGGAACAGGCCCGAGATGTGATAGGGAGAATTCTTTGGGTTCGATTGACTGGAAGCCACTTAAGTGGACCCGATCTGGAAGCTTGTCTTCTCGAGGCTCGGGTTTTAGTCACTCAAGTAGCTCAAGGAGCATGGCAGGGGGAGATTCCTATGAAGCAAGGCCTGACTTGCAACCCAAAAATGTCACTGCTGTTGAGTCGCATTCAGGGGAAGCCACTGCGTGTGTGACATCTTCTATGCCTTCTGAAGATACAACGTCTAGAAAGAAGCCTAGACTTAATTGGGGCGAGGGACTCGCAAAGtatgagaagaaaaaagttgACGTACCTGATCCAGGAACTAACAAAGATGGCTCGGTCTCATTTGCTGGTAATATGGAACCTTGTAATATGGTCAGCCCCAACATGATAGATAAAAGCCCAAAAGCTACAGGATCTTCGGATTGTGCATCTCCTGCAACTCCATCATCTGTTGCCTGCAGTTCCTCACCAGGCGTGGATGATAAGTTATTGGAAAAGACTGCAAATGCAGGTAATGATGTTGGTAATTTGGCTGATTCACCAGCTCCTGGGTTCCAGAATCACCTGCAGAAGTTTTATCTCAACCTTGATAAATTGGATATGGACTCCTTGAATAATTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCAAGTTCCGAAGATTCTGGTCTAGTTAGGTCCAATGCAATTAATAAGTTGCTGATATGGAAAGCCGACATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATTGATTTGCTTGAAAATGAACAGAAGTCTCTAAAATCTGAATCTGTGGACATATATCAGTGTCCAGTGGCATTGGGTTCAGAAGAACATGTTGAAGTATCTCAGAAGGTCATTCGGCCAGTACCGTTGGAAATCATTTCTTCTGATGAACCCAATGCAGATAAGATGCCGCCGCCTAATTTATGCAGTATTCATGAAAATGACAAGGAAGAGGATATTGATAGTCCTGGATCAGCAACATCTAAATTTGTTGAGCCTCCGCTGCCTTTGGTAAAAGCAGTTTCTTCATGTGATACTAGGGGATTTGGTAACTTATCAAGGGACATGGATACTATTCAATCTACTTCGATGAAATGGTTAGTCCGCTGTACTACTAGGAAAAATGCTAGTGTATCTGCTTGTAATGTTGTCAGTACACCTACAGAAGTAAAGGAAAGCTTGGATGATGTCACCTACGGAGCAACCTTATGTTCTAGCTATGAGGATACTTATAACTCAATTATTGCTTCAAATAAAGAATCTGCTAACAGAGCGCATGGAGTATTTGCTAAGTTAGTGCCAAAAGAATGTAAAAAGCTTGGTAATATGGGAGTCAGCAGTGATTTGTCCTCTCATAGATTCATTATGGAAAAATTTGCTGAGAAAAAATGCTTTGAAAAATTTAAGGAGAGAGTTATTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCCTACTGTCTGTTAGGAAATGCCGTCCAAAATCTCATAAGAAAAACGAACTAGGTGTGCGAACTACCTGTAGCATTAATATCAAGAACCGATCTTCCATCCGTTCACGGTTTCCTTTCCCTGCTGGAAATCATCTAAGCTTGGTTCCAACAGCAGAGATCATTAACTTCACAAGCAAACTTCTTTCAGAATCCCAACCTCAACTTCAGAGGAACACCCTGAGGATGCCATCATTAATATTGGATGAGAAGGAGAAGATGGTTACAAAGTTCATATCTAGTAATGGGCTGGTTGAAGATCCGTTGGCTATTGAGAAAGAAAGGGATATGATCAATCCTTGGACatcagaagaaaaagaaattttctTGGAGAAATTTGCTGCATTTGGAAAAGATTTCCGGAAGATTGCTTCTTTCGTTGATCACAAGACAACTGCGGACTGTGTTGAGTTTTACTACAAGAATCACAAATCTGAATGTTTTGAGAAACTGAAGAGGAAAGATGTTGGTAAGCTCGGGAAGTCATTTTCGGCTAAAACAAACTTGATGACATCAGGTAATAAAAGGATGCGGTCAGGAAGATTCCTTTTGGGGGGATATGGTAATGTTAAAGCATCAAGAGCTGAGGACAGCAATATTGAGAGATCAAACAGTTTTGACATTCTTGGGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCACTTTCATCTGAAGCTATGAGTTCCTGCATAACAAGTTCAATTGATCCCGTGGATGGTAACAAGGAAAGGAAGTTCTTGAGAGGGAACCCTCTATGCAAACAACCCTTGGTGCATGATATTTCTCAGAATGCTGACGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAGTGGACGTTTCTGAGTGGACAGATGACGAGAAGGCGGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTCGCAAAAATAGCACGATGTGTAGGTACAAGGTCCCGAGAACATTGCAAAGTTTTCTTCAGCAAGACTCGGAAGGTCCTTGGATTGGATCTCACACACCCCATTCCTGGAATTGTCAAATCCTCGCTGAATGATGATGCAAATGGTGGTGAGAGTGACACAGATGATGCATGTGTTGTTGAGGCAGGCTCAGTGGTTGATGCTGATAAGTCTGGAAATAAAACAGACGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGACGAATCCAATCCTATGGAAGCTAGGAGCCCGTCAGCTGAATTAAATGAAACAAGAGAAATCAGTGAGACAGAAGTACGTCTTGAAAATTTAGACGTGGCTTCCAATGTTTGTGCAATTAAGGTTGAATCTAAGCTGGGATCTGATGGCAGTGGGGTTGACTTGGACAAAACCGACAAGTCTGATTCAGTCAACGGAGTTGGCTTGGGCAAAACCGACAAGTCTGATTCAGTCAACGGAGTTGGCTTGGGCAAAACCGACAAGTCTGGTTCAGTCAACGGAGTTTGCTTGGGAGATGCAGTTAGAGAATCAGTTTCTGCTTCAGGAGTAATTGAACCACGGGAGTGTGGTTCTGTTGCTGTGGATAGCCTGGTTTATGAGCGTTCTTCTGGGGTTTTTGGAAATGGAGTGGATAGGCAAAGCGTGTCAGCACCCCAATGTGTTGATCACAGAGATGATAAACATGAAGCTGATGCAGGTATTGTACTTGAATTGAAAAACCGTGTGTTAGAGTCGAGCACTGCAGCAAATGTTTCATTCTCACCAGTAGTTAATTCATATTCAGGATTGAGTTCAGGATTGAGTTTTGGTTCTGAAAATAAGCACGTGTCCTTTGGAAAGCCTCACACCTCAGCATTATCTACAAACGATCCTCGGTCAACTGTAAATTCGTTGTTTCTAAAAGCTTCTGCTTCTCAGTGTGAAAAAACAGTTAACCAGGATAGACTGTCCTCAACTTGTGATATTCAGGGAGGTAGAGATATGCGATGTCATAGCTCTGGTAGCAATGGTGGTGACCATCAGCTTCCTCTTCCAGGGAGCCATGTCGAGACTGTCAGTATCCTCCAGGGCTATCCCATGCAAGTGCCCATCAAGAAAGAAGTGGATGGGGACGTGAATTGCTGCAGTTCTGCGACTGATTTGCCTCTTCTGCCCCAAAAAGTCAAACAGACTGATGATCATTTCAAAACATCATGGCATTCTTCAGATCCAGAAAAAACATCTGGAAATGGTGATGTGAAACTGAAACTGTTTGGGAAGATACTAACGAATCCTTCTTCTTCCACTCAGAAACCTAACTTGATTACAAAGCGAAGTGAAGAAAACGGTTCCAATCATCCAAAGTTAAGCAACAAGTCTTCTAATCTGAAATTTACTGGTCATCAAAATTCAGATGGAAATTCGAAAATTTTGAAGTTTGACCGTAGTGATTATGTTGGCCTTGAAAATGTTCCAGTGATGAGTTATGCTTACTGGGAGGGAAATGGAAGACAGAGTATACAGCCTGGTCTCCCGTCATTGCCCGATTCTTCGTTCTTGTTAGCTAAATATCCTGCTGCCTTCAGTAACTATCCTATACCATCTTCCAATTTGGAGCAACAACCATTGCAGGCATTTGTCAAGAATAATGAACGGCATTTGACTGGTGGATCTAGCTCATCTAGTTTTATAGCTAGAGACAACAATGGCAGCAATGGTATGCTTGATTATCAGATGTTTAGAAGTAGGGATGGTCCACAAGTGCAGCCATTTATAGTAGATGTCAAACACCGCCAAGATGTATTCTCTGAGATGCAGAGAAGAAACAGTTTTGAAGCAATCTCTAGTTTGCAACAGCAAGGGAGGGGAATGATGGGAATGAATGGTGTTGGAAGACCTGGGATTCTAGTGGGAGGGTCGTGCAGCGGTGTCTCAGATCCTGTGGCAGCAATCAAAATGCATTATTCCAATTCCGACAAAAAGTATGGTGGTCAGAATGGGAGTATTGTAAGAGAAGATGAATCTTGGGGAGGGAAGGGAGACTTAGGCAGGTAG 5073 0.4305 MPPEPLPWDRKDFFKERKHDRSESLGSVARWRDSSHHRDFNRWGSADFRRPPGHGKQGGWHMFSEEPGHGYGVSRSGDKMLEEDSRPSISRGDGKYGRSSRDNRGGPFGQRDWRGHSWEATNGSPNLSRRPQDMINDQRSVDDSLTYSSQPHSDFANTWEHHQSKDQHDKMGGVNGFGTGPRCDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSMAGGDSYEARPDLQPKNVTAVESHSGEATACVTSSMPSEDTTSRKKPRLNWGEGLAKYEKKKVDVPDPGTNKDGSVSFAGNMEPCNMVSPNMIDKSPKATGSSDCASPATPSSVACSSSPGVDDKLLEKTANAGNDVGNLADSPAPGFQNHLQKFYLNLDKLDMDSLNNLGSSIVELVQSDDPSSEDSGLVRSNAINKLLIWKADISKVLEMTESEIDLLENEQKSLKSESVDIYQCPVALGSEEHVEVSQKVIRPVPLEIISSDEPNADKMPPPNLCSIHENDKEEDIDSPGSATSKFVEPPLPLVKAVSSCDTRGFGNLSRDMDTIQSTSMKWLVRCTTRKNASVSACNVVSTPTEVKESLDDVTYGATLCSSYEDTYNSIIASNKESANRAHGVFAKLVPKECKKLGNMGVSSDLSSHRFIMEKFAEKKCFEKFKERVIALKFKALHHLWKEDMRLLSVRKCRPKSHKKNELGVRTTCSINIKNRSSIRSRFPFPAGNHLSLVPTAEIINFTSKLLSESQPQLQRNTLRMPSLILDEKEKMVTKFISSNGLVEDPLAIEKERDMINPWTSEEKEIFLEKFAAFGKDFRKIASFVDHKTTADCVEFYYKNHKSECFEKLKRKDVGKLGKSFSAKTNLMTSGNKRMRSGRFLLGGYGNVKASRAEDSNIERSNSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSIDPVDGNKERKFLRGNPLCKQPLVHDISQNADDETCSDESCGEVDVSEWTDDEKAAFLQAVSSFGKDFAKIARCVGTRSREHCKVFFSKTRKVLGLDLTHPIPGIVKSSLNDDANGGESDTDDACVVEAGSVVDADKSGNKTDEDLPSDALNTFHDESNPMEARSPSAELNETREISETEVRLENLDVASNVCAIKVESKLGSDGSGVDLDKTDKSDSVNGVGLGKTDKSDSVNGVGLGKTDKSGSVNGVCLGDAVRESVSASGVIEPRECGSVAVDSLVYERSSGVFGNGVDRQSVSAPQCVDHRDDKHEADAGIVLELKNRVLESSTAANVSFSPVVNSYSGLSSGLSFGSENKHVSFGKPHTSALSTNDPRSTVNSLFLKASASQCEKTVNQDRLSSTCDIQGGRDMRCHSSGSNGGDHQLPLPGSHVETVSILQGYPMQVPIKKEVDGDVNCCSSATDLPLLPQKVKQTDDHFKTSWHSSDPEKTSGNGDVKLKLFGKILTNPSSSTQKPNLITKRSEENGSNHPKLSNKSSNLKFTGHQNSDGNSKILKFDRSDYVGLENVPVMSYAYWEGNGRQSIQPGLPSLPDSSFLLAKYPAAFSNYPIPSSNLEQQPLQAFVKNNERHLTGGSSSSSFIARDNNGSNGMLDYQMFRSRDGPQVQPFIVDVKHRQDVFSEMQRRNSFEAISSLQQQGRGMMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKKYGGQNGSIVREDESWGGKGDLGR 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 200 223 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 313 339 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 1434 1479 - -
Tsu01g04152 1690 Pfam Myb-like DNA-binding domain 790 831 IPR001005 -
Tsu01g04152 1690 Pfam Myb-like DNA-binding domain 979 1019 IPR001005 -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 1 298 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 1083 1098 - -
Tsu01g04152 1690 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1662 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 8 45 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 1068 1082 - -
Tsu01g04152 1690 ProSiteProfiles SANT domain profile. 786 837 IPR017884 -
Tsu01g04152 1690 SMART sant 787 835 IPR001005 -
Tsu01g04152 1690 SMART sant 976 1024 IPR001005 -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 1667 1690 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 1062 1106 - -
Tsu01g04152 1690 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1662 - -
Tsu01g04152 1690 SUPERFAMILY Homeodomain-like 977 1026 IPR009057 -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 238 260 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 313 341 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 76 109 - -
Tsu01g04152 1690 CDD SANT 979 1018 IPR001005 -
Tsu01g04152 1690 ProSiteProfiles SANT domain profile. 975 1026 IPR017884 -
Tsu01g04152 1690 Gene3D - 947 1031 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 1135 1170 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 117 157 - -
Tsu01g04152 1690 MobiDBLite consensus disorder prediction 261 288 - -
Tsu01g04152 1690 SUPERFAMILY Homeodomain-like 774 835 IPR009057 -
Tsu01g04152 1690 Coils Coil 423 450 - -
Tsu01g04152 1690 Gene3D - 767 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04152 Tsu-Chr1 49488801 49498952 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tsu01g04152 Myb_DNA-binding 6.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04152 - - cam:101504689 2659.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04152 01 49488801 49498952 Tsu01g04152 01 49488801 49498952 ECH