Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04151 ATGGGTTATTCTATATTCTATGTTGTTTTGTTATTGTCAATTTTTTGTGTTGGAATTTCATTGGCTTTTAACATAGAAGATCAAAAGAGAGACAAGATTGGTTGGTTGCCAGGACAACCAAAGAATGTTGGATTTGAACAGTATTCAGGTTATGTGACTGTGAATGAACAAAGTGAAAGAGCATTGTTTTATTGGTTGATTGAAGCACCACTGAACCGTGGACCCAATTCTAGGCCACTAGTTTTATGGCTTAATGGTGGTCCTGGTTGTTCTTCTATTGCTTATGGTGCTTCTGAAGAAATTGGCCCTTTTCATATTAAGTCTGATGGCAAAACACTTTTCTTGAATCCTTATGCTTGGAACAATTTGGCAAATATATTGTTCCTTGATTCTCCTGCTGGAGTTGGTTTTTCTTATTGTAATAAATCAACAGATCTGTATACATTTGGTGACCAGAAAACAGCTGAGgatgcatatatttttctagTAAAATGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTCTACATTGCCGGGGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGGCTCAGCTTGTTTACCGGAGAAATAAAGGAATCAATAATCCAGATATCAATTTTAAGGGATTTATGGTTGGAAATGGTGTTACCGATGATTATCATGATTATGTTGGGACATTTGAGTACTGGTGGTCACATGGTTTGATTTCAGATTCAACATATAGGAATCTAAGAATTGCATGTGACTTTGGATCATCTCAGCATCCATCAGTGCAATGTATGCAGGCTCTTAGACTTGCAGTTGCTGAGCAAGGAAACATTGATCCATATAGCATTTATACACCGCCTTGTAACAATACCGGATCACTCGGACGCAGCTTGAACGGTCGTTATCCATGGATGTCTAGAGCGTATGATCCGTGTACCGAAAGGTATTCTGATTTGTATTACAATCGTCCGGAAGTTCAGAAGGCGCTTCATGCTAATGTAACTGGGATTCCATATGTATGGAAGACATGCAgTGATATTGTTGGGAATTATTGGACTGATTCTCCACTGTCTATGCTTCCTATATATCGAGAACTTATTAATGCCGGTCTGAAGATATGGGTATTCAGTGGAGACACTGATGCTGTAGTTCCACTCACCGCAACTCGATATTCTATTGATGCGTTGAAGCTTCCGACCATCATCAACTGGTACCCTTGGTATGATAGTGGCAAGGTTGGTGGATGGAGTCAAGTTTATAAAGGACTCACATTGGTTACAGTAAGAGGTGCTGGACACGAGGTTCCTCTTCATAAGCCTCGCGAAGCATTTATTCTTTTTAGATCATTCTTGGAGAACAAGTACATGCCATCAAGCTAA 1377 0.3871 MGYSIFYVVLLLSIFCVGISLAFNIEDQKRDKIGWLPGQPKNVGFEQYSGYVTVNEQSERALFYWLIEAPLNRGPNSRPLVLWLNGGPGCSSIAYGASEEIGPFHIKSDGKTLFLNPYAWNNLANILFLDSPAGVGFSYCNKSTDLYTFGDQKTAEDAYIFLVKWFERFPQYKHREFYIAGESYAGHYVPQLAQLVYRRNKGINNPDINFKGFMVGNGVTDDYHDYVGTFEYWWSHGLISDSTYRNLRIACDFGSSQHPSVQCMQALRLAVAEQGNIDPYSIYTPPCNNTGSLGRSLNGRYPWMSRAYDPCTERYSDLYYNRPEVQKALHANVTGIPYVWKTCSDIVGNYWTDSPLSMLPIYRELINAGLKIWVFSGDTDAVVPLTATRYSIDALKLPTIINWYPWYDSGKVGGWSQVYKGLTLVTVRGAGHEVPLHKPREAFILFRSFLENKYMPSS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04151 458 Gene3D - 358 451 - -
Tsu01g04151 458 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Tsu01g04151 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 457 IPR001563 GO:0004185|GO:0006508
Tsu01g04151 458 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Tsu01g04151 458 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Tsu01g04151 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Tsu01g04151 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Tsu01g04151 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Tsu01g04151 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Tsu01g04151 458 Gene3D - 311 347 - -
Tsu01g04151 458 SUPERFAMILY alpha/beta-Hydrolases 30 456 IPR029058 -
Tsu01g04151 458 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Tsu01g04151 458 PANTHER CARBOXYPEPTIDASE 14 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04151 Tsu-Chr1 49475184 49479280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04151 321 453 Calmodulin-binding Proteins AT2G22960 29.104 1.56e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04151 K16297 - gmx:100805722 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04151 01 49475184 49479280 Tsu01g04151 01 49475184 49479280 ECH