Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04129 ATGGCAAAGAAAACCCACTCTTCTCGTCAACCTTCATCACAAAACCCACATGCAAAAAAACCCACTCAAGATGATCCATCACAAACAACACCTCCTCCTTCAAAACCCTCACTCCCTTCTCAACCACCTTCACCTTCTAACTCCTCCCGTCCTAACCGTTCCAAGAAGCAAACACCCATCGCCGCCGCTGCAGCTGCCGCTAAATCTTCCAAGTCTCATAACCCTTTCTCCAAAAATGATGTAATCCTAATTCTCAAAGCTCTTTCAGATTTCAAATCTCATTCTGGAAACGATCCAGCCAAACACGCCAAAGTATTTCATGACTCATTGAAGGATTCACTTAGCATCAAATGTACAGTTAGAAAGCTCAGAGAAAAGGTTCGAGTTTTGAAGCTGAAATTTGAGAAGAATTGTCAAATCAATGAAAAAGATCTCACTTTTTCTAGTTCTTACGAGAAGGAAATTTTTGAACTTTCTAAGAAATTTTGGGGTCAAGAGAAAAGAGttgatgaaaaacaaaaacaacccaAGAAGAAAAATGTTGCTAAGAAACCTGTTAAGGAAGAATTTGCAAAAGGGGAAAGTAGTGGTCAAATGGGTCATGTTAATTTGAGTGGTGAAATGTGTATGGGTTTTAATGTGTTAAAGAGAGGCATGGAGTTGCTTGGGGAAGCAGAGAGGGAAGAGTTGGAATCAAGGTGGAAGAAGTTGAAAACTCAGGAAATGGAAGTGTTAGTGATGCGTGCCGAGTTAGCTAAAGATTATGCTAGATTGATCCTGGATGAATTAGAAGGATGA 798 0.391 MAKKTHSSRQPSSQNPHAKKPTQDDPSQTTPPPSKPSLPSQPPSPSNSSRPNRSKKQTPIAAAAAAAKSSKSHNPFSKNDVILILKALSDFKSHSGNDPAKHAKVFHDSLKDSLSIKCTVRKLREKVRVLKLKFEKNCQINEKDLTFSSSYEKEIFELSKKFWGQEKRVDEKQKQPKKKNVAKKPVKEEFAKGESSGQMGHVNLSGEMCMGFNVLKRGMELLGEAEREELESRWKKLKTQEMEVLVMRAELAKDYARLILDELEG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04129 265 PANTHER STOREKEEPER PROTEIN 10 264 - -
Tsu01g04129 265 Pfam Protein of unknown function, DUF573 75 164 IPR007592 GO:0006355
Tsu01g04129 265 MobiDBLite consensus disorder prediction 1 25 - -
Tsu01g04129 265 PANTHER BNAANNG10740D PROTEIN-RELATED 10 264 IPR007592 GO:0006355
Tsu01g04129 265 MobiDBLite consensus disorder prediction 167 191 - -
Tsu01g04129 265 MobiDBLite consensus disorder prediction 167 194 - -
Tsu01g04129 265 MobiDBLite consensus disorder prediction 1 76 - -
Tsu01g04129 265 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04129 Tsu-Chr1 49202217 49203571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04129 23 164 GeBP Transcription Factor Family AT1G61730 27.465 9.79e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tsu01g04129 DUF573 6.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04129 - K20478 cam:101514741 150.214