Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04120 ATGTGTAAATCAAAAAAGAGCACCACCGTAGTACAACCCACGAGAAGAATCtcaacatcatcatcttccACAACAAATTTCCCATCTTCTTCCAACACCGAATTCCCAATCACAGAATCAAGAAGTTACATATACACCGcagacaacaacaacaaacaatgGTCCAAAACTTCTTCATCAGTTTCAAGCCACTCATCTCTCTCAAGCCTCAAACAATCTCTCCCCGAAAACCCTCACATCTATCCTTTCTCAGAAATCTCAACCGCCACAGCTAACTTCTCAACCAACCGTCTCTCCTCAAATTCCTTCCGTTGTTATCTTCGCGATCGCGACGTCGTCGTTTTCCAGAGAAAATTCCGCCGGAAATTAGACATCCCAGAGCTTCGTGATCGACTTGCTCTTATCTGCCGGAGTCATCATAGCAGCCTTGTGAAGCTTCTCGGAGCTTCTGTTTCCGGTGGTTACATTTATCTTGTTTATGAATTTGTTCCCGGTGGTAATCTTTCCGATTGTCTTCGAAATCGTCGGAACCCTAGCTTCACGAATTTATCTACGTGGACTTTACGGATGCAAATTGCTTCCGATCTCGCTCACGGTCTTGATTATGTTCATAATTCTTCTGGTTCCGGTTCTGGTTTCGTTCATAATCATATTAAAAGCTCTAGTATAATCGTTACCGAGGAGAATTTTGGTGCTAAGATTTGTCACTTTGGTACATCGGAGCTTTGCGGCGAGTCTGTTACTATCGGAGATTCTTCTGTATCGGAGAAAAATTTGAAGAGGTCCGGTAGCCGGGGGGTGAGATTTGAGGGGACAAGAGGTTACATGGCGCCGGAATTTCTGCTAACCGGCGTTGCGACGCAGAAGACTGACGTGTATGCTTTCGGCGTGGTGGTTTTAGAGCTTCTGAGTGGGTTAGAGGCGGTGAGATTTGAGTTGGAAGGAAATGACGGCGGGTATAGAAGGGTCAGTGTGGTGGATACGGCGAGGGAAGCGTTGAAGGAGCACGGTGGCGTGAGAAAATGGGTTGATCGGAGATTGAGGGATTCATTTCCGATGGATGTTGCTGAGAAAATGATTCCGGttgggttgaattgtgtttcgGATGATCCGAATGAGAGACCGGATATGGGTCGGGTTTCGATGGAAGTATCCAAGTTGTATTTGGAATCGAAGGAGTGGGAAGAAAAATTGGGAACTAACATTGATTTTTCTGTCTCATTAGCCCCACGCTAA 1236 0.4369 MCKSKKSTTVVQPTRRISTSSSSTTNFPSSSNTEFPITESRSYIYTADNNNKQWSKTSSSVSSHSSLSSLKQSLPENPHIYPFSEISTATANFSTNRLSSNSFRCYLRDRDVVVFQRKFRRKLDIPELRDRLALICRSHHSSLVKLLGASVSGGYIYLVYEFVPGGNLSDCLRNRRNPSFTNLSTWTLRMQIASDLAHGLDYVHNSSGSGSGFVHNHIKSSSIIVTEENFGAKICHFGTSELCGESVTIGDSSVSEKNLKRSGSRGVRFEGTRGYMAPEFLLTGVATQKTDVYAFGVVVLELLSGLEAVRFELEGNDGGYRRVSVVDTAREALKEHGGVRKWVDRRLRDSFPMDVAEKMIPVGLNCVSDDPNERPDMGRVSMEVSKLYLESKEWEEKLGTNIDFSVSLAPR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04120 411 Gene3D Phosphorylase Kinase; domain 1 50 162 - -
Tsu01g04120 411 MobiDBLite consensus disorder prediction 1 35 - -
Tsu01g04120 411 PANTHER OS09G0572100 PROTEIN 1 411 - -
Tsu01g04120 411 Gene3D Transferase(Phosphotransferase) domain 1 163 405 - -
Tsu01g04120 411 Pfam Protein tyrosine and serine/threonine kinase 126 381 IPR001245 GO:0004672|GO:0006468
Tsu01g04120 411 PANTHER OS09G0572100 PROTEIN 1 411 - -
Tsu01g04120 411 SUPERFAMILY Protein kinase-like (PK-like) 104 384 IPR011009 -
Tsu01g04120 411 ProSiteProfiles Protein kinase domain profile. 92 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04120 Tsu-Chr1 49113391 49114695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04120 76 401 Receptor kinase-like Gene Family AT1G51940 34.320 1.47e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu01g04120 PK_Tyr_Ser-Thr 8.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04120 - - mtr:MTR_1g094730 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04120 01 49113391 49114695 Tsu01g04120 01 49113391 49114695 ECH