Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04119 ATGAATCATCTTCCTATGCTTTCCCATCAGCAACTACTTTACTTACTGACCATGTCTTTCATTTCAAGTGTGCCAAGAACACTGTTACCTGGTGTGCGCAGTTCTCGTCTGAGAGACCGtcagaaagaagaaagagagattTTAGTTAAACAGGCTTTTATAGAAGATATGCTGCAGGAAAACAAACTGCTATCCATTCTTCTCGGAAAAGAAGCTGCTAAACAAGTTGTTTTATGGAATGCTGATTTACTACCAGATTCTGGCAAATATCGCCGGTTGCCTGATTTAGCTTCTACTTCTGGGACCTATAAGGCGGACATGTCAAATGATAATATTAGTTCTGCAGATAAAAGTAGCCATTCTCTGCTTGATGAGATGAGTTTGTGCATGGAGAATCTGTCCGATTTATATGTTGGTTGTGATGATCTTCCATGTCACTTCCAAACTGATTCAGGTGCATTGGCTTGTGTGGGTTGTGGAATACTTGGTTTTCCATTTATGACACTAAGACAGCTGACTGAAAAATCGATATTGGACTTCTTCCTGATAATTATCATCTAG 561 0.3832 MNHLPMLSHQQLLYLLTMSFISSVPRTLLPGVRSSRLRDRQKEEREILVKQAFIEDMLQENKLLSILLGKEAAKQVVLWNADLLPDSGKYRRLPDLASTSGTYKADMSNDNISSADKSSHSLLDEMSLCMENLSDLYVGCDDLPCHFQTDSGALACVGCGILGFPFMTLRQLTEKSILDFFLIIII 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04119 186 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1 179 - -
Tsu01g04119 186 PANTHER LYSINE-SPECIFIC DEMETHYLASE ELF6-RELATED 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04119 Tsu-Chr1 49111475 49112838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04119 1 179 C2H2 Transcription Factor Family AT5G04240 52.688 4.88e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04119 - - lja:Lj5g3v1811440.1 281.952