Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04113 ATGAATAACTCAGCAGTTTCAGAGAACAGTTTTATTATTGAaagtgatgaagaagatgataagGATTTTAACAAAGGTGATGATGGTAATGATTCTGATTCTTCAAATTACTCCAATGAAAATCCACCTCAAAGGATACAAAGTTCTTACAATCCTTCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTACCATCACCGAATATTGGATTTCTAGGAACTTCTTCATTGTCAAGATTAAGCAGTTCCTTCCTTTCGACATCTTTAACAAGGAGGCACACTCCTGAAGTTCTTCCTTCGGTTACAAAACCTCTGATACAGACAATAGAAGATGAGCCGTCAAAAAGACGCAGCTCTCACGCCTTGCTTCCTCCCCTTTCTAGAAGGTCTTCTTTGCTTAAGAAAGAATCCAAGGTTTGTCATGAAGTTCCTTCTCGCCACTGCTCTTACGGACAGGCTGTGCTTAATGGCATAAATGTTCTTTGTGGAGTAGGAATCCTTTCAACCCCTTATGCTGCTAAAGAAGGTGGATGGGTTGGACTCTccattttgttcatttttggAATCATTTCATTTTATACCGGATTGCTCTTGCGATCTTGCTTGGACAGTGAACCTGGCCTTGAAACATACCCTGACATTGGCCAAGCTGCTTTTGGTACTACCGGACGTATCGCTATTTCAATAGTACTGTACGTCGAATTATATGGCTGTTGCAtagaatatataattttggaGGGAGACAATTTGGCTTCCTTGTTTCCAAATGCATACTTAAATTTAGGTGGAATTGAGTTGAGTCCACAAACGGTCTTTGCTGTGGTTGCTGCCTTGGCTGTTCTTCCTACAGTTTGGCTCCGCGACCTAAGCGTTCTTAGTTACATCTCAGCTGGTGGAGTTATAGCATCAGTTTTAGTGGTTCTGTGCTTGTTATGGATCGGCGTAGAAGACGTTGGCTTTCAACGCTCAGGGACAACACTCAATCTTGCAACTCTTCCTGTAGCTATTGGTCTTTACGGATACTGTTATTCTGGACATGCTGTGTTCCCAAATATTTATACTTCTATGGCAAATCCAAACCAATTTCCTGCAGTACTAGTAGCATGTTTCGGAGTTTGTACCTTACTATATGCTGGCGGTGCTTTTATGGGATACAAAATGTTTGGAGACGATACTCTCTCTCAATTCACTCTTAACCTGCCACAAGACTTGGTTGCAACCAAGATTGCTGTCTGGACTACGGTCGTTAATCCATTTACCAAGTATGCGTTGACTATATCTCCAGTTGCAATGAGTCTTGAAGAGTTGATACCGACAAACCATGCAAAGTCTTACCTATATTCCATTTTTATCAGAACAGGCCTTGTATTTTCTACCCTTGTTATTGGTCTCTCAGTTCCCTTTTTTGGTTTGGTGATGTCGTTAATTGGATCTTTACTTACAATGCTTGTAACTTTGATATTACCATGTGTTTGTTACCTAAGAATCGTGCGGGGCAAGGCCACGCGATTACAGGCAGGACTTTGCACTGGAATTATTATAGTAGGAGTTGTGTGTTCTTCGGTTGGAACGTACTCAGCCCTCGCCGAGATTGTTAAGAGTTTGAGTGGATGA 1626 0.4028 MNNSAVSENSFIIESDEEDDKDFNKGDDGNDSDSSNYSNENPPQRIQSSYNPSWPQSYRQSIDLYSSVPSPNIGFLGTSSLSRLSSSFLSTSLTRRHTPEVLPSVTKPLIQTIEDEPSKRRSSHALLPPLSRRSSLLKKESKVCHEVPSRHCSYGQAVLNGINVLCGVGILSTPYAAKEGGWVGLSILFIFGIISFYTGLLLRSCLDSEPGLETYPDIGQAAFGTTGRIAISIVLYVELYGCCIEYIILEGDNLASLFPNAYLNLGGIELSPQTVFAVVAALAVLPTVWLRDLSVLSYISAGGVIASVLVVLCLLWIGVEDVGFQRSGTTLNLATLPVAIGLYGYCYSGHAVFPNIYTSMANPNQFPAVLVACFGVCTLLYAGGAFMGYKMFGDDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPTNHAKSYLYSIFIRTGLVFSTLVIGLSVPFFGLVMSLIGSLLTMLVTLILPCVCYLRIVRGKATRLQAGLCTGIIIVGVVCSSVGTYSALAEIVKSLSG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04113 541 MobiDBLite consensus disorder prediction 1 54 - -
Tsu01g04113 541 MobiDBLite consensus disorder prediction 30 54 - -
Tsu01g04113 541 PANTHER - 27 538 - -
Tsu01g04113 541 PANTHER OS05G0424000 PROTEIN-RELATED 27 538 - -
Tsu01g04113 541 Pfam Transmembrane amino acid transporter protein 153 529 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04113 Tsu-Chr1 49045615 49050046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04113 3 474 Amino Acid or Auxin Permease AAAP Family AT2G39130 71.162 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04113 K15015 - gmx:100775840 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04113 01 49045615 49050046 Tsu01g04113 01 49045615 49050046 ECH