Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04042 atggaaTTTATAACTTGTGCATTACTCCTTCTCTTTACATGTACCACACTTCATTTTCTTTGGAGAAtcataaaaccaaaaaataatctTCCACCGGGCCCAATCCGTTTTCCGATCATCGGAAACCTCCTTGAACTTGGAGAAAAACCACACCAATCTTTAGCCAAACTAGCAAAGATTCATGGTCCAATAATGAGCCTCAAACTAGGAAGAATAACAACTATAGTAATTTCTTCAGCTGAAATCGCCAAAAAAGCGCTATTAACTCATGACCAATTCTTGTCAAATAGAACAATTCCTCAATCTGTTTCAGTTCTCAACCATGAACATTTTAGCCTTGCTTTCTTACCCGTTTCGCCACTTTGGCGCGAGTTGAGAAAAATATGCAATGGCGAATTATTTGCACATAAGACTCTTGATGATAGCCAAGATGTAAGGCGCAATAAAGTGCAACAACTTCTTCATGATGTGCACAAAAGTAGCCAAATTGGCGAAGCAATAGACTTTGGAAAAGAAGTATTCAAAACAACGATAAATTTATTATCGAACACTATTTTCTCCGAAGATTTGATTCAACCTACCGGCACAGCAGGAGAGTTTAAGGACTTGGTTACAAATATCACAAAATTAGTTGGATCACcaaacatagctgattttttcCCATTGCTTCAGGTCATTGATCCTCAAGGTGTGAAAAGACAACAAACTAAGAATGTTGCTAAGGTGTTGGACATCTTCGATCGATTGATTTGGAAACGTTTGAAGTCGAGGGAAAGCGAAGATTCTAACACACACAATGACATGTTAGATGCCTTACTGAATATTTCTAAAGAAAATGAGACGATGGACAAAAACATGATTGAACATTTGGCACATGATATTTTTGTTGCCGGAACAgacacaacaacatcaacactTGAATGGGCAATGACGGAACTAGTACTCAACTCAGAGATCATGTTAAAAGCAAAAAAGGAGCTAGAAGTGATAGGCAAAGGTAAACCTATTGAAGAATCGGATATTGCTAGACTCCCGTATTTGCAAGCAATCATAAAAGAGACATTTCGATTGCACCCTCCAGTTCCTCTTTTGCTCCCTCGAAAAGCAGCAAAAGAGGTGGAGCTATGTGGCTTCACCATCCCAAAAGATGCGCAAGTGTTTGTTAATGTGTGGACTATTGGTAGGGATCCAACTTTGTGGGACAATCCAACTTTATTCTCACCCGAAAGATTTCTTGGTACAGATATTGATGTAAAGGGTAGGAGTTTTGAGCTTGCGCCATTCGGTGCTGGAAGAAGAATATGCCCCGGTATAATATTAGCTTTAAGGATGTTGCTTTTGATGTTGGGATCATTAATCAACTCCTTTGATTGGAAGCTTGAAGATCACATGAAATCAAAAGATATGGACATGGAAGAAAAATTTGGCATTACCTTGCAAAAGGCACAACCTCTTCGAGTTGTTCCTATTAAGATTAGGAATTAA 1485 0.371 MEFITCALLLLFTCTTLHFLWRIIKPKNNLPPGPIRFPIIGNLLELGEKPHQSLAKLAKIHGPIMSLKLGRITTIVISSAEIAKKALLTHDQFLSNRTIPQSVSVLNHEHFSLAFLPVSPLWRELRKICNGELFAHKTLDDSQDVRRNKVQQLLHDVHKSSQIGEAIDFGKEVFKTTINLLSNTIFSEDLIQPTGTAGEFKDLVTNITKLVGSPNIADFFPLLQVIDPQGVKRQQTKNVAKVLDIFDRLIWKRLKSRESEDSNTHNDMLDALLNISKENETMDKNMIEHLAHDIFVAGTDTTTSTLEWAMTELVLNSEIMLKAKKELEVIGKGKPIEESDIARLPYLQAIIKETFRLHPPVPLLLPRKAAKEVELCGFTIPKDAQVFVNVWTIGRDPTLWDNPTLFSPERFLGTDIDVKGRSFELAPFGAGRRICPGIILALRMLLLMLGSLINSFDWKLEDHMKSKDMDMEEKFGITLQKAQPLRVVPIKIRN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04042 494 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 493 - -
Tsu01g04042 494 Pfam Cytochrome P450 31 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 Gene3D Cytochrome P450 22 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04042 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Tsu01g04042 494 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04042 Tsu-Chr1 48266898 48268588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04042 7 491 Cytochrome P450 AT2G45550 45.800 5.09e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04042 - K23810 gmx:100798291 784.252