Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04011 ATGGATTATGTTAGCAATGCAATGCTCCTTTTGTTGACATGCATTGTCACATACTTCATTGGCTCACTTTATGCAAGAAGCAGAAAATCAAGCTACAAGCTTCCACCAGGACCTTCCATTTTTACTATTATGTCACATGTTTTTGAATTATACTATAAGCCACAACAAACACTTGCTAAATTTGCTAAGTTTTATGGTCCTGTTATGCTTATTAAATTATGCACAGAGACCACTGTGATTATTTCATCATCAGAAATGGCCAAAGAAATTCTTCATACTAATGATTCTTTGTTCACTGATAGATCTGTTCCTGATAACACAACTACTCATAATCACAACAATTTTAGTATTGTCTTTCTCCCATTTTCACCTCTTTGGCAACACCTTAGAAAAATATGCCATAATAGTTTATTCTCTAATAAGACTCTTGATGGAAGTCAAGAACTTAGGCGTATGAAATTGAAAGATCTTCTTAACGATATGCATAAAAGCAGCTTAACTGGTGAAGCTGTTGATGTTGGAAGAGCTGCTTTTAAGGCTTGCAttaattttttgtcatataCTTTTGTGTCACAAGATTTTGTTGAGTCATTGGATGATGAATATAAGGATATAGTTTCCACTCTTTTGAGTGCTATTCTTGACCCACAAGGCATTAAAAGGCACACTactaaatatgttgcaaaagtGTTCTATGCCTTAGATATCATAATTGACAAACGAATGAAGCTAAGACAAAGTGAAGATTATGTCTCAAAGAATGACATGTTAGACACcttgttggacatttctaaaGAAGATAGCCAAAAGATGGATAAAAAACAGATTAAACATCTATTACTTGATTTACTTGTGGCGGGAACAGAAACATCAGCATATGGATTAGAAAGGGCAATGACTCGACTAGTACACGATCCAAAGGCTATGTCAAAAGCAAAAAAGGAACTTGAGAAAACTATTGGAATTGGGAATCCTATTGAGGAATCCGACATTGATAGACTTCCATACTTACAAGCAGTAATAAAAGAGAGCTTGCGTTTACACCCTCCAGCTCCAATGTTGCTTCCTCGAAAAGCAAGAGTAGATGTAGAAATATCAGGGTACACAATTCCAAAAGGTGCCCAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAAATATATGGGATGATGCCGATTTGTTTTCACCTAAAAGATTTTTAGGATCTGAAATTGATGTCAAAGGTCGACACTTTAAACTTACACCGTTCGGTAGTGGAAGGCGTATATGTCCCGGATCACCACTTGCTGTTAGGATGTTACATTTGATGTTGGGGTCATTAATCAATTCATTTAATTGGAAACTTGAAAATAATATGGAGCCTAAGGACATGAACTTGGACAAACCTCTAAGAGCTATTCCAATTCCAGTTGTTCTAAACAACATTAAGTAA 1434 0.3466 MDYVSNAMLLLLTCIVTYFIGSLYARSRKSSYKLPPGPSIFTIMSHVFELYYKPQQTLAKFAKFYGPVMLIKLCTETTVIISSSEMAKEILHTNDSLFTDRSVPDNTTTHNHNNFSIVFLPFSPLWQHLRKICHNSLFSNKTLDGSQELRRMKLKDLLNDMHKSSLTGEAVDVGRAAFKACINFLSYTFVSQDFVESLDDEYKDIVSTLLSAILDPQGIKRHTTKYVAKVFYALDIIIDKRMKLRQSEDYVSKNDMLDTLLDISKEDSQKMDKKQIKHLLLDLLVAGTETSAYGLERAMTRLVHDPKAMSKAKKELEKTIGIGNPIEESDIDRLPYLQAVIKESLRLHPPAPMLLPRKARVDVEISGYTIPKGAQVLINEWAIGRTNIWDDADLFSPKRFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFNWKLENNMEPKDMNLDKPLRAIPIPVVLNNIK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04011 477 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 471 - -
Tsu01g04011 477 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 SUPERFAMILY Cytochrome P450 35 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 Gene3D Cytochrome P450 22 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 Pfam Cytochrome P450 35 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g04011 477 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 471 - -
Tsu01g04011 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04011 Tsu-Chr1 47867965 47869958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04011 1 462 Cytochrome P450 AT2G45550 39.344 2.78e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04011 - - gmx:100800810 634.795