Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03933 ATGTCATTGTTGATGTTTTCATTGATCCATCAACAGGCTGAGGCAAAAATACTCAAAGGGCCGCACGAAGACCTGGAAAACTATCTTGAAGCAATTGCTAAGTTGAGAAGCAACATTCAGTTTTTTGGCAGTAAGAACAATTTTAAGAATAGTGACGGTGTTGTTAGCCATGCCAGTAGTTTGCTAAATAAGGCTATTTCTAAGCTACAGGACGAGTTTAATCAGCTATTACTATCTTACAGCAAACCTGTGGAACCCGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCGTCAGGATCACCTGGTCATGAGGGTGATCATAATGGCAAGTCCAATCATCATTCTGAGTCTCACAATAGTATTGCTGATGCTGTTGTCTACACACCTCCCGCTCTTATACCACCAAGAATTTTGCCACTGCTACATGATTTAGCTCAGCAAATGATTGAAGCTGGTCACCGACCACAGTTACTCACAATGTACAGGGAAGCCCGTTCTAATGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGACGATGTTCAAAAGCTGCAATGGGAAATTTTGGAGGCCAAAATCGGAAACTGGATTCATTTCATGCGAATAGCAGTGAAATTGCTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCGCTGAACAGTGTTTTGCCGAGGTGACAACAAATAGTGTGTCTATGCTACTTAGCTTTGGAGAAGCCATAGCCAAAAGCAAGAGATCGCCAGAAAAACTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTGCATTCAGAGATTGAAACACTTTTTAAAGGCAAAGCTTGTGCTGCAATAAGAGACGCTGCAATGGCTTTGACAAAACGACTTGCACAAACAGCACAGGAAACATTTGGAGATTTTGAAGAAGCGGTTGAAAAAGACGCTACAAAGACTGCAGTAACAGATGGAACTGTTCATCCTTTGACTAGCTATGTTATTAACTATGTCAAGTTTTTGTTTGACTATCGGTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGTGGAACTGATTCTTCCCAGCTAGCTACTGTAACAATGCGAATAATGCAAGCTTTACAAATCAATCTAGATGGAAAATCAAAGCAGTATAAAGACCCTGCACTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTGCTCGGTGATGATTGGGTACAAAGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGACTTGCCTCATCAGGTGGTGGAAGTAGTAATGCAGGTGGTGATGGCGGAGCTGGAAGTAGTAGCGGTGcttcaagagcacttgttaaaGAAAGGTTTAAGACATTCAATGTTATGTTCGAGGAACTACATCAGAAACAATCACAATGGACAGTTCCTGACAGCGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGATGCCTGCCTATAGATCATTCGTGAAACGTTTTGGGCCTCTAGTGGAGAGTGGAAAGAATCCGCAGAAGTACATAAAATACACCGCAGAAGATCTAGATCGAATGTTGGGCGaattttttgaaggaaaaaacaTGAATGAAACCAAGCGGTAA 1734 0.4083 MSLLMFSLIHQQAEAKILKGPHEDLENYLEAIAKLRSNIQFFGSKNNFKNSDGVVSHASSLLNKAISKLQDEFNQLLLSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDHNGKSNHHSESHNSIADAVVYTPPALIPPRILPLLHDLAQQMIEAGHRPQLLTMYREARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLAEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACAAIRDAAMALTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGTDSSQLATVTMRIMQALQINLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLASSGGGSSNAGGDGGAGSSSGASRALVKERFKTFNVMFEELHQKQSQWTVPDSELRESLRLAVAEVLMPAYRSFVKRFGPLVESGKNPQKYIKYTAEDLDRMLGEFFEGKNMNETKR 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03933 577 MobiDBLite consensus disorder prediction 91 121 - -
Tsu01g03933 577 Pfam Exo70 exocyst complex subunit 203 564 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu01g03933 577 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 9 573 - -
Tsu01g03933 577 Gene3D Exocyst complex component Exo70 5 577 - -
Tsu01g03933 577 SUPERFAMILY Cullin repeat-like 11 568 IPR016159 -
Tsu01g03933 577 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 573 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03933 Tsu-Chr1 46929867 46934457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03933 6 577 EXO70 exocyst subunit family AT5G03540 72.788 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03933 K07195 - gmx:100813987 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03933 01 46929867 46934457 Tsu01g03933 01 46929867 46934457 ECH