Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g03924 | ATGAACAACACTTCCATTAATTCTGAAAACCCTTCAGAAAAATCAACTACATTACCATATTATTACATTGGATTTTCTTTTGCATTTATCCTCCTTGTGATCTTCATACCTATCTATTTCAGTTACTGTAACCATACGAATTCGCGAAACAGACAGCAATCTGCTGCTGGTAGCAACAACAACAGAACAGTGATCTTGATGGAGAGAGATCATACAACTGAAGTGAATATTGAAGAACAAGATGATAATATCCTTAATAGTTACCCCGTTTTGTTCTACTCTCAAATTAAGCTTCATAAGCCTGCAGATTCAACATCACTTATTTGCTCAATTTGTTTGGCAGATTATAAAGATTCGGAGTTGTTGCGAGTCTTATCTGATTGTGGTCACTTTTTTCATAAGGAATGTGTTGCTACATGGTTTAGGCTAAATATGTCATGTCCAATGTGTCGAAACTCGCCACTTCCAACATCCCTTGCTCAAGTTACACCATTGGTAAACTAG | 504 | 0.3631 | MNNTSINSENPSEKSTTLPYYYIGFSFAFILLVIFIPIYFSYCNHTNSRNRQQSAAGSNNNRTVILMERDHTTEVNIEEQDDNILNSYPVLFYSQIKLHKPADSTSLICSICLADYKDSELLRVLSDCGHFFHKECVATWFRLNMSCPMCRNSPLPTSLAQVTPLVN | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g03924 | 167 | SUPERFAMILY | RING/U-box | 85 | 154 | - | - | |
Tsu01g03924 | 167 | SMART | ring_2 | 109 | 150 | IPR001841 | - | |
Tsu01g03924 | 167 | Pfam | Ring finger domain | 109 | 151 | IPR001841 | - | |
Tsu01g03924 | 167 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 44 | 155 | IPR013083 | - | |
Tsu01g03924 | 167 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 161 | IPR045899 | - | |
Tsu01g03924 | 167 | ProSiteProfiles | Zinc finger RING-type profile. | 109 | 151 | IPR001841 | - | |
Tsu01g03924 | 167 | PANTHER | ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN | 1 | 161 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g03924 | Tsu-Chr1 | 46886278 | 46886781 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g03924 | 21 | 167 | C3H Transcription Factor Family | AT2G35910 | 39.474 | 4.03e-26 | 97.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g03924 | - | - | adu:107466513 | 164.466 |