Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03918 ATGAGTTTCAATTCTAACAAGTTGAACCAAAGCAGCAAACTTCTGGAAAAGAAATCAATGAGTGAGACTAATGATCAAGGACAAGTCTTGAAGATTAATGGAAACACAATTTCTATGAAAAACTATGCACTTTCATCTGAAGAACAGAACAAGCTTATTTGTGAGATACAAAGTGTTCTAAAAGATCAAAACCACGTTATTGATGATAACAAGTTACGGTTAGTTATAAACACAATCATGAAACACTGTTTTGAATTATTACAGATGAAAACACGTTCTGCAAATGTAGATGTCTTCAATGTTAGTTCTGCTACAACATGTGAACGCAATCTATGGTGGATTGGAGGCTTTCGTCCTTCTCAACTTCTTCAGgTTATTCTGCCTCAAGTTCAACATATGTGCAGCAAGCAACAACTTAGTGATGTTTATGATCTTGGACAATCATGTCAAGTAGCAGAATATGCTCTTGCACAAGGCTTGGTAAAACTCCAGCAAAATATTGATAAAGCAACACCAACAGATGACAAAGAGTTTCTACTGTCGTATGTACATCAACAACTATGCTTCTTCAAGCAGGCTGATAATCTTCGCCAGGAATTCTTACATCAATTTTCTCGTCTCCTTACAATTACTCAGCAAGCTGAATTCATTGTTGCTCTCAAGGAACATCTGCATAATCCGCAGCCTCGGAGGAGCTCACTTTGA 705 0.3688 MSFNSNKLNQSSKLLEKKSMSETNDQGQVLKINGNTISMKNYALSSEEQNKLICEIQSVLKDQNHVIDDNKLRLVINTIMKHCFELLQMKTRSANVDVFNVSSATTCERNLWWIGGFRPSQLLQVILPQVQHMCSKQQLSDVYDLGQSCQVAEYALAQGLVKLQQNIDKATPTDDKEFLLSYVHQQLCFFKQADNLRQEFLHQFSRLLTITQQAEFIVALKEHLHNPQPRRSSL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03918 234 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 1 232 - -
Tsu01g03918 234 MobiDBLite consensus disorder prediction 1 22 - -
Tsu01g03918 234 ProSiteProfiles DOG1 domain profile. 35 234 IPR025422 GO:0006351|GO:0043565
Tsu01g03918 234 PANTHER TRANSCRIPTION FACTOR TGA9 1 232 - -
Tsu01g03918 234 Pfam Seed dormancy control 54 127 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03918 Tsu-Chr1 46862224 46864115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03918 42 224 Calmodulin-binding Proteins AT5G10030 42.857 1.09e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03918 K14431 - mtr:MTR_1g090370 324.709