Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03899 ATGCCAGGCTTTCCTGTCGCGGCTGGTGAACCATGTAATTTTATAAGCACAGATCAACAACCTAGTCCTCTAGATGCTTCTGTACAATTATCTGCAGAAGAGAAAGTTGTTGCAGAACAGAGTCTTTCAGTTTATTGCAAGCCTGTAGAGTTTTACAACATTCTTCATCAACGTATTTTGCAAAGTAATCCATTTTTCATTCCGAGATGTTTAGAGTACAGGAGAGAGGCTAGgagaaaaaaaagGACACAAATGACAGTTATGCTGTCATGGAATGATGAAGAAACTCAAAATGTGTTTCCTTTGTATATCGGTCTGGCAAGACGTGATCCTAATAATAAAGGGACTGATtattcTGCTGTTTATCTACTCAGTCAGATATATACCTTTCGAGGTTCCCCCGGCACTGACGGGAACTATAAAATCAAAGCAGAGTTTTTGCTCTGGGAAGTTCACGAGTTAGCAGCGGAAGGCTCactttttctcttgtttttcaCCACTGAGGgaaattcaaatttatcatCTAGAGTCAATGCAAGCCTGGGGCCTTCAGATCCGACTTCTCATGAATCAATAGCTGAAAAGATCTGCTTATACGAGAAAATttcttttcaatcaatttatatGGCTTGGGATAGTTCTCCGAATTTCCTTTGGGGACAACGAGCTGAGATTATGACTACTCTTGATCTGCTTCCATGTATTTTGAAGTATGATGTTCTAAATAAGGGCACGACCATCGCAATCCAAGATCTCCGGAATTCTGAGATTGTGAGTACATCAAAGCATGTTCAAATCAAAATCTTTGCTGAAGAGCTCAGGGGCATGGAGAAATCTCTCAACTATACAAATGTCAGGATTAATGTACCATCATTATCATCACCATCGTCGTCGTCATCTCGTGTCATTCGGTTGAAAGAAGGAAAAGTGCAATTTAATTACAGGTATTTCAATAACAAATTGCAGAGAACAGAAGACACTGAAGATTTCTCCTGTCCATTCTGTTATTTAAGATGTGCAAGCTATAAGGGTCTAAGATGTCATCTGCTCGCATCACATGATCTTTTCAACTATGAATTTTCGGCATCGGAACATTGTCTGGCTGTTAATGTGTCTTTGAATTATGATACCTGGAGAACCGAGATTATTGGAGATAAAGTTGATCCAAAAGTGCAAACTTTTTACCTTCGTTGCAAGCGATACAAGCACACAAGTCCAGAAGTTGCATGTTTTGAAGAGTTCCAGGGTGCTGACTCACCGGCCTTAGCTAATAATGCTGACCCACCGGTCGTTGCTATGGATGTTGACCCGCCAGCCTTTGCTATGGATGCAAACCCACCGGTTTTAGCTATGGATGCAGACCCACCGGTCTTAGCTAATGATACAGACCCACCAAACTTAGCTATTGATGCAGACCCACCGGTCTTAGCTATTGATGCAGGCCCACCAATCTTATCTATTGATGCGGACCCACCGGTCTTAGATATTGATGCGGACCCACCGGTCTTAGCTATTGATGCGGACCCATCAATCTTACCTATTGATGCGGACCCACCGGTCTTATCTATTGATGCGGACCCACCGGTATTAGTTATGGATGCGGACCAACCAGTCTTAGCTATTGATGCGGACCCACCACTCTTAGCTACGGATGCAGATCCACCAGTCTTAGCTATTGATGCGGACCAACCACTCTTAGCTACGGATGCAGATCCACCGGTCTTAGCTATTGATGTGGATCCACCGGCCATATCTACGGATGCAGACCAACtattctcagagtctgaaactcCTTTAGGAGATATTGAGTTTTTGAAGAAGGCTGATGGAAATTCTGCAACTATATCAGGAGTTGCAAATGAAAATGTTGTATCCAATCCTGATCCAGATTGTATCCCACCAATATCTGAGCATGACCAAGGGACTCCTGCAGTGCCACAGGTTGACAATGCAGCGAAGTTAGACGAACAAAGCATAGCCCGGTTGAAGACGCGAAAATTTTATCATTCTCACAAAGCCCAGGCAATGTCAATTGAAGAAGTTCTATCAGATTATGATAGTGAGAATGAAGTTGATCAAGAAGTTGAAGACATTGAAGAGCGAACAAGGCTTAATGTTCATGATGTTAGCAAAGAAGAGAAGGAATTCATGTTCATGTGGAACTCATTTATACGGAAGCAACGTGTACTGGTAGATTCTCACGTTCGTTGGGCATGTAAAGCTTTCTCAGTATTGCATGGCACTGAGCTTGTTAAATCCCGTGAACTATCTTGGTGTTGGAGAATGTTCAGGCTTAAATTATACAATTTTGGTCTTATAGATGGAAAGGTAATGAACGATTGCAGTATTATTCTCGAACAATACGAGAAGCAAAAATCAAATCCTGAGATCCCAATAGCTAATATAAACTCCATTCTTTTGACCCCTCGTAaaagtaaaagaagaaaatga 2451 0.4051 MPGFPVAAGEPCNFISTDQQPSPLDASVQLSAEEKVVAEQSLSVYCKPVEFYNILHQRILQSNPFFIPRCLEYRREARRKKRTQMTVMLSWNDEETQNVFPLYIGLARRDPNNKGTDYSAVYLLSQIYTFRGSPGTDGNYKIKAEFLLWEVHELAAEGSLFLLFFTTEGNSNLSSRVNASLGPSDPTSHESIAEKICLYEKISFQSIYMAWDSSPNFLWGQRAEIMTTLDLLPCILKYDVLNKGTTIAIQDLRNSEIVSTSKHVQIKIFAEELRGMEKSLNYTNVRINVPSLSSPSSSSSRVIRLKEGKVQFNYRYFNNKLQRTEDTEDFSCPFCYLRCASYKGLRCHLLASHDLFNYEFSASEHCLAVNVSLNYDTWRTEIIGDKVDPKVQTFYLRCKRYKHTSPEVACFEEFQGADSPALANNADPPVVAMDVDPPAFAMDANPPVLAMDADPPVLANDTDPPNLAIDADPPVLAIDAGPPILSIDADPPVLDIDADPPVLAIDADPSILPIDADPPVLSIDADPPVLVMDADQPVLAIDADPPLLATDADPPVLAIDADQPLLATDADPPVLAIDVDPPAISTDADQLFSESETPLGDIEFLKKADGNSATISGVANENVVSNPDPDCIPPISEHDQGTPAVPQVDNAAKLDEQSIARLKTRKFYHSHKAQAMSIEEVLSDYDSENEVDQEVEDIEERTRLNVHDVSKEEKEFMFMWNSFIRKQRVLVDSHVRWACKAFSVLHGTELVKSRELSWCWRMFRLKLYNFGLIDGKVMNDCSIILEQYEKQKSNPEIPIANINSILLTPRKSKRRK 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03899 816 PANTHER POLYCOMB GROUP PROTEIN 25 795 - -
Tsu01g03899 816 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 25 795 - -
Tsu01g03899 816 Pfam VEFS-Box of polycomb protein 655 783 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03899 Tsu-Chr1 46731469 46747285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03899 573 789 C2H2 Transcription Factor Family AT5G51230 41.818 2.82e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03899 - - cam:101511538 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03899 01 46731469 46747285 Tsu01g03899 01 46731469 46747285 ECH