Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03890 ATGGCGGATATTAAACTACATGGATTTTGGTATAGTCCTTTTACTTTAAGGGTAGTGTGGACCCTAAAACTGAAGGGTATACCATATGAGAACATAGAGGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTGAATATAACCCAGTTCACAAAAAGACTCCTGTGCTAGTTCATGATGGAAAACCTATATGTGAGTCCATGATCATTGTTGAATACATTGATGAGATATGGCCACAGAATTCATTACTTCCTGCTGACCCCTATGACAGAGCTCAAGCTcgattttgggttaaatatgttgaTGAAATGTTTTCAGGAATTGCGGCACACTTTCGTAGCAGAAGTGGTGAAGAGCGAGAGAAGGCCAAAGAGAATATATGGGAGCGACTGATAGTCATTGAGGATCAATGTTTGGGTGATCAAAAGAAATTCTATGGGGGAGATACCATTAACATTGTAGACATAGCACTAGGATCTTTTGTCAACATTATTGCGGTTCAGGAAGATATGTTTGAAGTGAAGATCTTGCAAACCGAGAAGTTCCCCCGTCTGCATTTATGGTTTAATAATTTCAAGAATGTTCAAGTCATCAAAGAAAACACCCCTGGTCAAGAGAAGTTGGTGGCTTTTTTAAAGCCTCTTGttgaaaaaatgttttcatcttcttga 669 0.3662 MADIKLHGFWYSPFTLRVVWTLKLKGIPYENIEEDRFNKSPQLLEYNPVHKKTPVLVHDGKPICESMIIVEYIDEIWPQNSLLPADPYDRAQARFWVKYVDEMFSGIAAHFRSRSGEEREKAKENIWERLIVIEDQCLGDQKKFYGGDTINIVDIALGSFVNIIAVQEDMFEVKILQTEKFPRLHLWFNNFKNVQVIKENTPGQEKLVAFLKPLVEKMFSSS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03890 222 CDD GST_N_Tau 4 77 - -
Tsu01g03890 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Tsu01g03890 222 SFLD Main (cytGST) 1 219 - -
Tsu01g03890 222 Pfam Glutathione S-transferase, C-terminal domain 113 191 IPR004046 -
Tsu01g03890 222 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
Tsu01g03890 222 Gene3D - 83 221 - -
Tsu01g03890 222 Gene3D Glutaredoxin 1 82 - -
Tsu01g03890 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Tsu01g03890 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Tsu01g03890 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 216 - -
Tsu01g03890 222 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Tsu01g03890 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Tsu01g03890 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Tsu01g03890 222 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03890 Tsu-Chr1 46660280 46662243 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03890 4 221 Glutathione S-transferase Gene Family AT3G09270 47.748 3.72e-59 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03890 K00799 - gmx:547584 328.946