Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03887 ATGGCAGAGATTAAACTACATGGATTTTGGTATAGTCCTTATACTTTAAGGGTAGTATGGACCCTAAATTTGAAGGGTATACCATATGAGAACATAGAGGAAGATCGTTTCAACAAGAGTCCTCAACTTCTTGAATATAACCCAGTTCACAAAAAGACTCCTGTGCTAGTTCATGATGGAAAACCTATATGTGAGTCCATGATCATTGTTGAATACATTGATGAGATATGGCCACAGAATTCATTACTTCCTGCTGATTCCTATGACAGAGCTCAAGCccgattttgggtcaaatatattgatgatatgatttcAGCAATGTCAGCACACTTACGTAGCAGAAGTGGTGAAGAGCGAGAGAAGGCTAAAGAGAATATATGGGAGCGACTCAAAGTAATTGAGGATCAGTGTTTGGATGATCAGAAGAAATTCTATGGGGGAAACACTATTGACATGGTAGACATAGCTCTTGGATCCTTTGTCAAATTTATTGAAATTCAGGAAGATATGTTTCAAGTGAAGATCTTGCAAAGTGAGAGATTTCCCCGCCTGCATTTATGGTTTAATAATTTCAAGGATGTTCCAGCCGTCAAAGAAAACATCCCTGCTCAAGAGAAGTTGGTGGCCTTTTATAAGCCTctgattgaaaaaatattggCATCGGCTTGA 669 0.3617 MAEIKLHGFWYSPYTLRVVWTLNLKGIPYENIEEDRFNKSPQLLEYNPVHKKTPVLVHDGKPICESMIIVEYIDEIWPQNSLLPADSYDRAQARFWVKYIDDMISAMSAHLRSRSGEEREKAKENIWERLKVIEDQCLDDQKKFYGGNTIDMVDIALGSFVKFIEIQEDMFQVKILQSERFPRLHLWFNNFKDVPAVKENIPAQEKLVAFYKPLIEKILASA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03887 222 CDD GST_N_Tau 4 77 - -
Tsu01g03887 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Tsu01g03887 222 CDD GST_C_Tau 88 212 IPR045074 GO:0004364|GO:0006749
Tsu01g03887 222 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
Tsu01g03887 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Tsu01g03887 222 Gene3D - 86 222 - -
Tsu01g03887 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
Tsu01g03887 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Tsu01g03887 222 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Tsu01g03887 222 Gene3D Glutaredoxin 1 85 - -
Tsu01g03887 222 SFLD Glutathione Transferase (cytosolic) 1 220 IPR040079 -
Tsu01g03887 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 217 - -
Tsu01g03887 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03887 Tsu-Chr1 46612463 46621100 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03887 4 221 Glutathione S-transferase Gene Family AT3G09270 44.144 6.01e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03887 K00799 - gmx:547584 317.775