Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03852 ATGGCTGGTAGTAATGAAGTCAACCTTAATGAATCTAAGAGTGTTGTTCCTCTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTTGCTTACAATCTACTAAGGCGTGCCGATGGAACATTCAATAGAGAGTTAGCTGAGTTCCTTGACCGCAAGGTCCCGGCCAATACAATTCCAGTTGATGGAGTGTTCTCTTTCGATCACGTGGATCGAAATACAGGACTGTTTAGTAGGGTTTATCAACCTGCTCCGGAGAATGTTACTACTTGCGGCATTATAGAGCTGGAAAAGCCCTTAAGCACCACAGAGATTGTACCTGTCATAATCTTCTTCCACGGTGGAAGCTTCTCTCATTCCTCTGCTAATAGCGCTATCTATGACACTTTCTGCCGTCGCCTCGTGAGCATGTGTAAGGCTGTTGTTGTTTCTGTAAACTACCGGCGATCACCCGAGCATAGGTATCCGTGTGCTTACGAAGACGGTTGGAATGCTCTCAATTGGGTTAAGTCAAGGACATGGCTTCAAAGTGGAAAGGATTCTAAGGTTTATGTTTACATGGCCGGCGATAGTTCTGGCGGTAACATTGCTCATCATGTCGCAGTGAGGGCTGCTGAGGAAGATGTCGAGGTACTAGGTAATATTCTTCTCCATCCACTTTTCGGTGGGGAGAAGCGTACGGAATCAGAGAAGAAACTGGATGGAAAGTATTTCGTGAAGTTGCAAGATCGCGATTGGTATTGGAGAGCTTTTCTACCTGAAGGGGAAGATAGAGATCACCATGCTTGTAATCCATTTGGACCTAAAGGTAAAAGCCTTAAAGGACTTAAGTTCCCTAAAAGCCTTGTTTGTGTGGCCGGTTTGGATCTTCTACAAGATTGGCAATTGGAATATGCGGAAGGTCTCAAGAATTATGATCATGATGTCAAACTTCTTTACCTAAAGGAAGCTACTATTGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATTGCCTCATGAATGAGATAAACACGTTCGTGCACCCTCCTAACTGTTGA 1038 0.4383 MAGSNEVNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFSRVYQPAPENVTTCGIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSMCKAVVVSVNYRRSPEHRYPCAYEDGWNALNWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTESEKKLDGKYFVKLQDRDWYWRAFLPEGEDRDHHACNPFGPKGKSLKGLKFPKSLVCVAGLDLLQDWQLEYAEGLKNYDHDVKLLYLKEATIGFYFLPNNDHFYCLMNEINTFVHPPNC 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03852 345 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Tsu01g03852 345 PANTHER GIBBERELLIN RECEPTOR GID1B 2 341 - -
Tsu01g03852 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Tsu01g03852 345 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Tsu01g03852 345 SUPERFAMILY alpha/beta-Hydrolases 58 334 IPR029058 -
Tsu01g03852 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Tsu01g03852 345 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03852 Tsu-Chr1 46340916 46344148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03852 1 341 Carbohydrate Esterase AT3G63010 78.655 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03852 K14493 - gmx:100804463 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03521 07 41389212 41391182 Tsu01g03852 01 46340916 46344148 PCT