Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03849 ATGGGTTCAAAACCGTGGCTATATCCTGCTCCAACTTATCGACCTATAGAAAGTTTTTGGGATACTGATGAAGATGCGCCTGGTCCTCGTTGTGCTCATACTCTAACTGCCGTCGCTGCTACTAAGTCTCATGGTCCTCGTTTGATTCTATTCGGTGGTGCCACTGCCATTGAAGGAGGATCTTCTTCAGCTCCCGGCATTAGATTAGATGGAGTTACGAATTCCGTTCATTCTTATGATATTGATACAAAAAAATGGACTAGGATTAAACCTGCAGGAGATCCGCCGTCTCCTCGGGCTGCTCATGCCGCTGCAACGGTTGGCACTATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCCGGACATTCGACGGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGAGTCCTTGTACAAGGGCAAGGACCGGGGCCTCGCTACGGACATGTAATGGACTTGGTTTCTCAGAGGTATCTTGTTACCGTCAGCGGAAATGATGGGAAACGAACTGTATCCGATGCTTGGACTCTGGATACCGCTCAAAAACCATATGCATGGCAGAAGCTGAACCCAGAGGGTGACAGGCCTTCTGCTAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTCTTACTCTGTGGTGGAAGAGACTCTTCTGGAACTCCACTAGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCACGTGGGAATGGACTCTTGCACCTGGGGTTTCCCCTTCACCTAGGTATCAACATGCATCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTTAGGGGCGGGCGAGCTGTGGAAGGTGAAGCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGATAGAAATGGCCTTGTGTCCTCATCACGCTCAAACAAAGGTCGTGATCATGACCCTTCTTTGGAGCTTATGCGTCGATGTCGCCATGCAGCAGCAGCCGTTGGTGTTCAAGTCTATATCTATGGTGGTCTTAGAGGAGATTTACTACTGGGTGATTTCTTAGTGGCTGAAAATGCGCCATCGCAGTCCGAAATTAGTGAGAGAGGTTCACCTTTTACAAGTCCCAAACATAATCTAAAAACACCAGGTTTGGATGGTGGACCAGAAACCCCATCATTTGGTGGATCAGGCTTGGACAAAGTTTCCCTGGAGAAACTGAGGGAGGCATCAGCAGCTGAAGCTGAGGCCGCTAGTGCTGTCTGGCAATCTGTGCAAGCTATATCAAGTAGTCCTGCTGATGAAAGATCCGTGTCAGATGACAACTCACATGCTGCTGATGCAGTTTCGGATGGAAGTGACACAGAGGGAGATGTTCACCTTCATCCTAGAGCTGTTGTAGTTGCTAAAGAGACTGTAGGTAACCTAGGTGGACTGGTGAGACAATTATCACTTGATCAGTTTGAAAATGAAAGCAGACGCATGCTTCCCATAAATAACGATTTGCCATATCCAAAAAAGTTCACCAGGCAAAAATCTCCTCAGGGTTTACATAAAAAGATAATTTCAAATTTGCTCAGGCCTCGCAACTGGAAAGCACCTTCAAATAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCATGAGCCAACTGTTCTTCAGCTGAAAGCTCCTATCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTCTTTGATGAATATGGATTTCCTTCAACCGCAGGAGACATAACGTATATTGACTACCTGTTTTTAGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACCATTACATTGCTACTTGCTCTTAAGATTGAATATCCTGACAATGTTCACTTGATACGTGGAAACCATGAAGCCGCTGACATAAATGCATTATTTGGTTTTCGTATAGAGTGCATTGAACGAATGGGTGAAAATGATGGAATATGGGCGTGGACAAGATTCAATCAACTTTTTAACCATCTTCCACTCGCTGCTcttattgaaaagaaaattatctGTATGCATGGTGGCATTGGAAGATCTATCCATTCAGTAGAACAGATAGAGAAGATTGAAAGGCCCATAACAATGGATGCAGGGTCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAAAATGATAGCGTGGAGGGTCTGAGACCAAATGCTAGAGGGCCAGGGCTCGTCACTTTCGGGCCTGACCGCGTTACTGAATTctgtaagaaaaataaattacagCTCATTATAAGAGCCCATGAGTGTGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACACTATTTTCTGCAACTAATTACTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTGGTCGGCAGGGGTTTGGTTGTGGTCCCAAAATTAATTCATCCCATACCACCTCCCCTTCAGTCACCCGAGTCTTCTCCTGAGCGTGTCATGGACGAGACATGGATGCAGgaACTTAATATTCAGAGGCCACCAACTCCTACTCGGGGTCGACCACAGTCTGACCTTGACCGTGGCTCCCTAGCGTATATATGA 2616 0.4541 MGSKPWLYPAPTYRPIESFWDTDEDAPGPRCAHTLTAVAATKSHGPRLILFGGATAIEGGSSSAPGIRLDGVTNSVHSYDIDTKKWTRIKPAGDPPSPRAAHAAATVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVLVQGQGPGPRYGHVMDLVSQRYLVTVSGNDGKRTVSDAWTLDTAQKPYAWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGTPLADAYGLLMHRNGTWEWTLAPGVSPSPRYQHASVFVGARLHVTGGVLRGGRAVEGEASIAVLDTAAGVWLDRNGLVSSSRSNKGRDHDPSLELMRRCRHAAAAVGVQVYIYGGLRGDLLLGDFLVAENAPSQSEISERGSPFTSPKHNLKTPGLDGGPETPSFGGSGLDKVSLEKLREASAAEAEAASAVWQSVQAISSSPADERSVSDDNSHAADAVSDGSDTEGDVHLHPRAVVVAKETVGNLGGLVRQLSLDQFENESRRMLPINNDLPYPKKFTRQKSPQGLHKKIISNLLRPRNWKAPSNRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPDNVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNHLPLAALIEKKIICMHGGIGRSIHSVEQIEKIERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPESSPERVMDETWMQELNIQRPPTPTRGRPQSDLDRGSLAYI 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03849 871 MobiDBLite consensus disorder prediction 362 398 - -
Tsu01g03849 871 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 871 - -
Tsu01g03849 871 Pfam Calcineurin-like phosphoesterase 568 775 IPR004843 GO:0016787
Tsu01g03849 871 ProSitePatterns Serine/threonine specific protein phosphatases signature. 637 642 IPR006186 GO:0016787
Tsu01g03849 871 MobiDBLite consensus disorder prediction 846 871 - -
Tsu01g03849 871 SMART pp2a_7 540 824 IPR006186 GO:0016787
Tsu01g03849 871 Gene3D - 194 363 IPR015915 GO:0005515
Tsu01g03849 871 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 871 - -
Tsu01g03849 871 Pfam Galactose oxidase, central domain 115 155 - -
Tsu01g03849 871 Pfam Galactose oxidase, central domain 45 105 - -
Tsu01g03849 871 Pfam Serine-threonine protein phosphatase N-terminal domain 519 566 IPR031675 -
Tsu01g03849 871 Gene3D - 504 842 IPR029052 -
Tsu01g03849 871 MobiDBLite consensus disorder prediction 430 457 - -
Tsu01g03849 871 PIRSF STPPP_BSU1 1 871 IPR012391 GO:0004721|GO:0009742
Tsu01g03849 871 SUPERFAMILY Metallo-dependent phosphatases 523 831 IPR029052 -
Tsu01g03849 871 Gene3D - 7 193 IPR015915 GO:0005515
Tsu01g03849 871 PRINTS Serine/threonine phosphatase family signature 636 660 IPR006186 GO:0016787
Tsu01g03849 871 PRINTS Serine/threonine phosphatase family signature 674 700 IPR006186 GO:0016787
Tsu01g03849 871 PRINTS Serine/threonine phosphatase family signature 704 731 IPR006186 GO:0016787
Tsu01g03849 871 PRINTS Serine/threonine phosphatase family signature 764 784 IPR006186 GO:0016787
Tsu01g03849 871 PRINTS Serine/threonine phosphatase family signature 786 802 IPR006186 GO:0016787
Tsu01g03849 871 PRINTS Serine/threonine phosphatase family signature 568 595 IPR006186 GO:0016787
Tsu01g03849 871 PRINTS Serine/threonine phosphatase family signature 603 630 IPR006186 GO:0016787
Tsu01g03849 871 SUPERFAMILY Kelch motif 68 356 IPR015915 GO:0005515
Tsu01g03849 871 MobiDBLite consensus disorder prediction 362 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03849 Tsu-Chr1 46294395 46306052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03849 569 767 Calmodulin-binding Proteins AT5G63870 32.609 6.18e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03849 K01090 - gmx:100805538 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03849 01 46294395 46306052 Tsu01g03849 01 46294395 46306052 ECH