Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03847 ATGCTACTTTTAAGCTTCCTTCTGGTCTGTCATGGAGGCAGCCTCAGGAAGAGCTTTTACCAGCATTCCTGCCCTCAAGCCGACGACATTATCAAGACCAAAACATTGCAGCATGTCTCTGCTGATCCCAACTTACCTGCTAAATTGCTTAGACTGCATTTTCACGACTGCTTTGTCAGGGGATGTGATGGCTCCGTTTTGTTGAACTCTACTGCCAATAACACTGCAGAGAAGGATTCAATTCCTAATTTAACAGTGGCTGGCTTTGATGTCATTGATGATATAAAAAATGCGGTCGAGAAAAAATGTCCCAAAACTGTTTCTTGTGCTGACATATTAGCATTAGCCGCTAGGGACGCTGTTTCAGCACAATTTAACAAACCTTTGTGGGAAGTGCTCACTGGTAGAAGAGACGGCACAGTGTCGAAAAGTAGTGAAGCCTTGGCCAATATCCCAGCACCTTTCTTCAACTTCACTCAACTCAAACAAAACTTTGCACGTAAAGGTCTTACCGTGCATGATCTGGTTGTATTATCAGGAGCACACACAATTGGAATAGCACACTGCAACTCCTTCAGTAACCGGCTTTATAACTTCACGGGAAAAGGCGATCAAGACCCTTCTTTGGATTCAACATATGCTGCATTCTTGAAAACTAAATGTAAGAGTCTGAGTGACACCACTACAAGGGTGGAGATGGATCCTGGCAGCTCTGGCAATTTCGACAGTCACTATTATCCTAACCTTCTTCAGAAAAAGGGTCTGTTTCAATCAGATGCTGCACTTCTAACACAAGATCAGTCAAAAGGTATTGCTGAAGAATTGGTTAATCAAAACAAGTTTTTCACAGAGTTTGCACAGTCAATGGAGAGGATGGGAGCTATTAAGGACCTCACAGGCTCGGCTGGGGAAATTCGGATCAAGTGTTCCATTGTCAACTCATAA 945 0.4328 MLLLSFLLVCHGGSLRKSFYQHSCPQADDIIKTKTLQHVSADPNLPAKLLRLHFHDCFVRGCDGSVLLNSTANNTAEKDSIPNLTVAGFDVIDDIKNAVEKKCPKTVSCADILALAARDAVSAQFNKPLWEVLTGRRDGTVSKSSEALANIPAPFFNFTQLKQNFARKGLTVHDLVVLSGAHTIGIAHCNSFSNRLYNFTGKGDQDPSLDSTYAAFLKTKCKSLSDTTTRVEMDPGSSGNFDSHYYPNLLQKKGLFQSDAALLTQDQSKGIAEELVNQNKFFTEFAQSMERMGAIKDLTGSAGEIRIKCSIVNS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03847 314 Pfam Peroxidase 37 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 ProSiteProfiles Plant heme peroxidase family profile. 14 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 87 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PANTHER PEROXIDASE 25-RELATED 4 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Tsu01g03847 314 Gene3D Peroxidase, domain 2 152 292 - -
Tsu01g03847 314 CDD secretory_peroxidase 15 312 IPR033905 GO:0004601|GO:0042744
Tsu01g03847 314 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 Gene3D - 18 313 - -
Tsu01g03847 314 SUPERFAMILY Heme-dependent peroxidases 15 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu01g03847 314 PANTHER PEROXIDASE 4 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03847 Tsu-Chr1 46283770 46284996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03847 2 314 Peroxidase AT1G05260 55.937 3.87e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03847 K00430 - gmx:100799691 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04172 07 47402718 47409893 Tsu01g03847 01 46283770 46284996 PCT