Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03846 ATGCTACTTTTAAGTTTCCTTGTGGTCTGTCATGGAGGCAGCCTCAGCAAGAGCTTTTACCAGCATTCCTGCCCTCAAGCCGACGACATTATTAAGTCCAAAACATTGCAGCATGTCTCTGCTGATCCCAACTTACCTGCTAAGTTGCTTCTAATGCATTTTCATGACTGCTTTGTCAGGGGATGTGATGGCTCAGTTTTGTTGAACTCTACTGCCAATAACACTGCAGAGAAAGATTCATTTCCTAATTTAACAATGACCGGCATTTTTGATGTTATTGATGATATAAAATATGCGGTCGAGAAAAAATGTCCCAAAACTGTTTCTTGTGCTGACATATTAGCATTGGCCGCTAGGGACGCTGTTTCAGCGAAATTTAACAAACCTTTGTGGGAAGTACCCACTGGTAGAAGAGATGGCACAGTGTCGAAAAGTATTGATGCCTTGACCAATATCCCATCGCCTTTCTTCAACTTCACCCAACTCAAACAAAATTTTGCACGTAAAGGCCTTACCGTGAGTGATATGGTTGTATTATCAGGAGCACACACAATTGGAATAGCTCACTGCAATTCCTTCAGTAACAGGCTTTATAACTTCACCGGAAAAGGCGATCAAGACCCTTCTTTGGATTCAACATATGCTGCATTCTTGAAGACTAAATGTAAGAGTCTGAGTGACACCACTACAACAGTGGCGATGGATCCTGGCAGCTCTGGCAATTTCGATAGTCACTATTATCCTAACCTTCTTCAGAAAAAAGGTCTGCTTCAATCAGATGCTGCACTTCTAATAGAAGATCAGTCAAAAGGTATTGTCCAAGAATTGGttaatcaaaacaattttttcacaGAGTTTGCAAAGTCAATGGAAAGGATGGGAGCCATTGAGGTCCTCACAGGCTCGGCTGGGGAAATTCGGATCAAGTGTTCTGTTGTCAACTCATAA 948 0.4135 MLLLSFLVVCHGGSLSKSFYQHSCPQADDIIKSKTLQHVSADPNLPAKLLLMHFHDCFVRGCDGSVLLNSTANNTAEKDSFPNLTMTGIFDVIDDIKYAVEKKCPKTVSCADILALAARDAVSAKFNKPLWEVPTGRRDGTVSKSIDALTNIPSPFFNFTQLKQNFARKGLTVSDMVVLSGAHTIGIAHCNSFSNRLYNFTGKGDQDPSLDSTYAAFLKTKCKSLSDTTTTVAMDPGSSGNFDSHYYPNLLQKKGLLQSDAALLIEDQSKGIVQELVNQNNFFTEFAKSMERMGAIEVLTGSAGEIRIKCSVVNS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03846 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Tsu01g03846 315 Pfam Peroxidase 37 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 SUPERFAMILY Heme-dependent peroxidases 15 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Haem peroxidase superfamily signature 127 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 Gene3D Peroxidase, domain 2 153 293 - -
Tsu01g03846 315 PANTHER PEROXIDASE 25-RELATED 4 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PANTHER PEROXIDASE 4 313 - -
Tsu01g03846 315 PRINTS Plant peroxidase signature 88 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Plant peroxidase signature 127 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 Gene3D - 18 314 - -
Tsu01g03846 315 ProSiteProfiles Plant heme peroxidase family profile. 14 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g03846 315 CDD secretory_peroxidase 15 313 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03846 Tsu-Chr1 46275648 46276904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03846 15 315 Peroxidase AT1G05260 55.921 5.34e-116 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03846 K00430 - gmx:100799691 501.13