Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03824 ATGGCACTCAAGATTTATGGTCTCGCCATGTCGACAAACACAACTCGTGCCATGATTTGTTTACATGAAAAAGAAGTTGATTTTGAGCTTGTTCCAGTCAATGTGTTTGCTTCTGAGCATAAGCAGCCtccttttctcaacaaaaatCCCTTTGGTTTGATTCCTGTACTTGAAGATGATGATCTCACCCTCTTTGAGTCAAGAGCCATAACCTCATATGTAGCTGAAAAATTCAAGGAAATTGGACCTGATTTGATTAGGCACAAAGACATAAAAGAAGCTTCATTAGTCAAAATGTGGACAGAAGTAGAGTCTCACTACTATGATCCTGCAGTCTCACCAATAATCTATGAATACTTTGTGGCTCCATTTCAAGGCCAAGAACCAAACAAGACGGTGATTGAAACAAACATGGAGAAGCTGAAGATTGTGCTTGATGTGTATGAGGCAAAACTAAGCACAACAAAGTACCTTGCTGGAGATTTCTATAGTCTTGCTGATCTTAGTCATATATCTGAAACTCACTATTTTATGCAAACCCCTTGTGCTTCAATGATCAATGAAAGGATTCATGTTAAGGCTTGGTGGGAAGATATATCTTCTAGGCCtgcttttcaaaaagttgttgGTGGTATGACTTTTGGTCAGAATGATCAGAAGTGA 663 0.371 MALKIYGLAMSTNTTRAMICLHEKEVDFELVPVNVFASEHKQPPFLNKNPFGLIPVLEDDDLTLFESRAITSYVAEKFKEIGPDLIRHKDIKEASLVKMWTEVESHYYDPAVSPIIYEYFVAPFQGQEPNKTVIETNMEKLKIVLDVYEAKLSTTKYLAGDFYSLADLSHISETHYFMQTPCASMINERIHVKAWWEDISSRPAFQKVVGGMTFGQNDQK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03824 220 Gene3D Glutaredoxin 1 85 - -
Tsu01g03824 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 220 IPR010987 -
Tsu01g03824 220 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Tsu01g03824 220 CDD GST_C_Phi 92 209 IPR034347 -
Tsu01g03824 220 Gene3D - 87 209 - -
Tsu01g03824 220 SFLD Main (cytGST) 1 212 - -
Tsu01g03824 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Tsu01g03824 220 PANTHER GLUTATHIONE S-TRANSFERASE F13 2 218 - -
Tsu01g03824 220 SUPERFAMILY GST C-terminal domain-like 73 212 IPR036282 -
Tsu01g03824 220 Pfam Glutathione S-transferase, C-terminal domain 116 203 IPR004046 -
Tsu01g03824 220 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 218 - -
Tsu01g03824 220 SFLD Main.5: Phi-like 1 212 - -
Tsu01g03824 220 SUPERFAMILY Thioredoxin-like 2 80 IPR036249 -
Tsu01g03824 220 CDD GST_N_Phi 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03824 Tsu-Chr1 46036324 46037581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03824 1 215 Glutathione S-transferase Gene Family AT3G62760 57.674 2.08e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03824 K00799 - gmx:100815147 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03824 01 46036324 46037581 Tsu01g03824 01 46036324 46037581 ECH