Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03823 ATGGCAACAATAAAAGTGCAGGGAAGTCCCTACTCAACGGCAACAATGCGGGTTACTGCAATTCTGTGTGAAAAACAGCTTGAATTTGAGTTAGTTTACATTAACGTAAGGAATGGTGATCACAAAAAGGAACCTTTCATATCAAACAATCCATTTGGTCTAGTTCCTGCATTTGAAGATGGAGATTTAAAGCTCTTTGAATCAAGGGCAATAACACAATATATTAATCATGAATATGCTGATAAGGGAACTAAGTTAACAATCAATGACTCCAAGAAACTGGCAATAATGAGGATGTGGTCAGAAGTGGAGAGCCTACACTTTGATCAAGCAGCATCAAAACTTGTTTGGGAACTAGGGATAAAACCTTTATTTGGAGCACCTTTGGATCCAAAAATTGTGGAAGAGAATGAAAACAAGTTGGATAGTATTCTTAATGTGTATGAGAAAAGATTGTCAGAATCCAAATACTTGGGAGGTGAATCTTTCACCTTGGTAGATTTACATCACTTACCCTCACTTCATTATTTGATGAAGTCACATATCAAAAAGTTGTTTGAATCAAGACCTTATGTTAGTGCTTGGGTGGCTGATATAACTGCAAGACCAGCTTGGTCTAAAGTCATTGCCATGATACCTAATTAA 645 0.3674 MATIKVQGSPYSTATMRVTAILCEKQLEFELVYINVRNGDHKKEPFISNNPFGLVPAFEDGDLKLFESRAITQYINHEYADKGTKLTINDSKKLAIMRMWSEVESLHFDQAASKLVWELGIKPLFGAPLDPKIVEENENKLDSILNVYEKRLSESKYLGGESFTLVDLHHLPSLHYLMKSHIKKLFESRPYVSAWVADITARPAWSKVIAMIPN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03823 214 Gene3D - 89 214 - -
Tsu01g03823 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Tsu01g03823 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Tsu01g03823 214 Pfam Glutathione S-transferase, N-terminal domain 8 76 IPR004045 -
Tsu01g03823 214 CDD GST_C_Phi 92 209 IPR034347 -
Tsu01g03823 214 Pfam Glutathione S-transferase, C-terminal domain 114 203 IPR004046 -
Tsu01g03823 214 SUPERFAMILY GST C-terminal domain-like 82 209 IPR036282 -
Tsu01g03823 214 Gene3D Glutaredoxin 1 87 - -
Tsu01g03823 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 212 - -
Tsu01g03823 214 SFLD Glutathione Transferase (cytosolic) 1 211 IPR040079 -
Tsu01g03823 214 SFLD Main.5: Phi-like 1 211 - -
Tsu01g03823 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 212 - -
Tsu01g03823 214 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03823 Tsu-Chr1 46031278 46032631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03823 1 209 Glutathione S-transferase Gene Family AT1G02920 59.809 1.63e-85 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03823 K00799 - gmx:100799868 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03823 01 46031278 46032631 Tsu01g03823 01 46031278 46032631 ECH