Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03813 atgaagttttgCAAGACCTACCAGAGCTATATGCGAGATCAGGAGCAGAACAAGCTCCCTGTCGTTGGATTCAAGAATCTCAAAAAGATCATCAAAAAATGTAGACGATCTTCTCAATTCCACAAAACCTGCCCCGATCAATGCCCAGtGTGTGATGGGACCTTTTTCCCTTCTCTTCTCAATGAAATGTCAGAAATAATAGGATGCTTTAATCAGCGTGCACAGAAATTGCTGGAAAAACATCTTGCATCTGGATTCAGAAAGTACATTCTCATGTTGAAAGGAAAATCAAAAGGAAATCACACTACTTTAATTCATGAAGGCGGAGATCTAGTTACCTATGCACTGATAAACGCTGTTGCAATTCGCAAAATACTAAAGAAATATGATAAGGTTCATTATTCCAAGCAAGGGCAATTATTCAAGTCACAAGCCCAGACTATGCACAAGGAGATTCTTCAGAGTCCTTGGCTTATTGAGCTTATGGCATTACATATCAACTTAAGGGAAACTAAAGTCAACCACTTAAGGGAAACTAAAGTCAACAACTTAGGGGAAACTGAAGCCAACTCAAGGAAGGCACCTGCATTATTCAATCAGGATGATAAATTCACATTTCAGGATGATGATAAACCATCACTTGCTTGTGAGCTCTCTGATTCTATCAAAATAGACATTGACTTGACATGTTCTATATGCTTGGTAAGTTTCTTGGTTTCTTTTGTTGGACGAATTTCTCTTTTCTGTGCCTCACTCCGATTTTGGATGTTTTCATTTGGATTGCACATATGCAAGACTATATCAACTTACAGATcttga 819 0.3761 MKFCKTYQSYMRDQEQNKLPVVGFKNLKKIIKKCRRSSQFHKTCPDQCPVCDGTFFPSLLNEMSEIIGCFNQRAQKLLEKHLASGFRKYILMLKGKSKGNHTTLIHEGGDLVTYALINAVAIRKILKKYDKVHYSKQGQLFKSQAQTMHKEILQSPWLIELMALHINLRETKVNHLRETKVNNLGETEANSRKAPALFNQDDKFTFQDDDKPSLACELSDSIKIDIDLTCSICLVSFLVSFVGRISLFCASLRFWMFSFGLHICKTISTYRS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03813 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 237 IPR033326 -
Tsu01g03813 272 ProSiteProfiles SPX domain profile. 1 143 IPR004331 -
Tsu01g03813 272 CDD SPX_BAH1-like 2 139 - -
Tsu01g03813 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03813 Tsu-Chr1 45895586 45899240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03813 K16275 - gmx:100803060 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03813 01 45895586 45899240 Tsu01g03813 01 45895586 45899240 ECH
Tsu01g03813 01 45895586 45899240 Tsu07g04228 07 47829872 47833004 PCT