Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03799 ATGGTTGGGTATTTGTCCAGTATACTTGGGTATGCTGAGAAATGTGAAAGCTACTTGATTTTTAGTGGTGAAACTGCTCTTGGGAATAGTGTtaggatatttttttattttcttggtcTTGCTTATTGTTTCTTTGGATTATCGGCTATAACGGCCCGATTCTTTCAATCTATGGAAAATGTGGTGAAACATACAAGGGAGGTAGTGGTGATAGATCCTGTTACTAAAGCTGAAATTATTACACATGAAAAAGTTTGGAATTATACAATTGCAGATATTAGTTTGTTGGCCTTTGGAACCAGTTTTCCTCAGATATCGTTAGCTACTATTGATGCTATACGAAATATAGGGAATCTCTATGCTGGAGGTTTGGGACCTGGAACACTCGTGGGTTCTGCTGCGTTTGACCTCTTCCCCATCCACGCTGTTTGTGTAGTAATTCCAAAAGCTGGAGAGTTGAAAAAGATTGCTGATCTAGGAGTATGGATAGTGGAGTTAATTTGGTCATTTTGGGCTTATTTTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTGATAACTTTGTCGGAGGCCTTGTTGACAGTACTTCAGTATGGATTACTGTTGATTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCTCTACCTATTGCAAGAGATGAAAGGCCGGAAGATTGGGTGCCGGAAGAGACTCCTAGACAAAATTCCCTTGAGACGGTGGAGTGCTCTGAGATCACTCATTTTAATGAAGAGAACAGGGACACTGTTGATATTTTTTCCATTCATTCAGAAAACTCAAGAGATACATACGTAAGAGTACCGCAAACAGACAATGCAGAAAATTCTGGCAAATTTATGGAAACAGAGCTTGAGGATACCTGCTTGCTTACTATTTGGAGACAGCAATTTGTGGATGCACTGACGGTGGAGAGCCAACAATCTAAAAAGATGGACAATATCTATATCCGCATAGCTAAAATTTTCTGGCAGTTGTTGCTTTTACCATGGAGATTTATGTTTGCTTTTGTTCCCCCATGCCATATTGCTCACGGTTGGATTTCTTTCATTTGCTCTCTGATTTTCATCAGTGGGATAGCTTACATTGTGACTAAGATAACGGATCTTATAAGTTGTGTCACAGgAATAAATGCCTACGTCATAGCATTTACAGCACTAGCCGGTGGAACCTCATGGCCTGATTTAGTGGCGAGCAAGATTGCTGCTGAACGTCAAAAAACAGCAGACTCTGCAATTGCAAACATCACTTGCAGTAATTCAGTGAATATATACGTCGGCATTGGTGTTCCATGGCTTATAGATACTTTGTACAATTTCATTGCATATAGAGAACCTCTCCGAATCCAAAATGCCGGGGGACTTAGCTTTTCATTGATAGTTTTCTTCGCCACTTCTGTTGGATGTATCTCAGTTTTGATTCTTAGGCGTATAGTTTTTGGTGCAGAACTTGGAGGACCAAGGCTTTGGGCATGGATTACCTGTGCGTTTTTCATGCTGCTATGggttatttttgttgtactatCCTCACTTAAGGTTTCCGGATTCATTTAG 1581 0.3928 MVGYLSSILGYAEKCESYLIFSGETALGNSVRIFFYFLGLAYCFFGLSAITARFFQSMENVVKHTREVVVIDPVTKAEIITHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVIPKAGELKKIADLGVWIVELIWSFWAYFWLYIILEVWTPNVITLSEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETPRQNSLETVECSEITHFNEENRDTVDIFSIHSENSRDTYVRVPQTDNAENSGKFMETELEDTCLLTIWRQQFVDALTVESQQSKKMDNIYIRIAKIFWQLLLLPWRFMFAFVPPCHIAHGWISFICSLIFISGIAYIVTKITDLISCVTGINAYVIAFTALAGGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQNAGGLSFSLIVFFATSVGCISVLILRRIVFGAELGGPRLWAWITCAFFMLLWVIFVVLSSLKVSGFI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03799 526 Gene3D - 88 223 IPR044880 -
Tsu01g03799 526 Gene3D - 307 520 IPR044880 -
Tsu01g03799 526 PANTHER SODIUM/CALCIUM EXCHANGER 10 214 - -
Tsu01g03799 526 Pfam Sodium/calcium exchanger protein 35 208 IPR004837 GO:0016021|GO:0055085
Tsu01g03799 526 Pfam Sodium/calcium exchanger protein 355 518 IPR004837 GO:0016021|GO:0055085
Tsu01g03799 526 PANTHER SODIUM/CALCIUM EXCHANGER 301 526 - -
Tsu01g03799 526 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 10 214 - -
Tsu01g03799 526 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 301 526 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03799 6 526 Antiporters AT2G47600 71.186 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03799 K03452 - gmx:100792839 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03799 01 45722156 45728409 Tsu01g03799 01 45722156 45728409 ECH