Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03774 atggcgGCATTGTCTTTTTCAGTTGCATCTGTTGTTCAGGATGTTCTTCAACAACATGGTACTCGTCTCAAAGATCTTGATTTGGAATCTAGAAAATCAGAAGAAGCTGCATTCAGAAGATATGAAGCAGCAGGGTGGTTGAGGAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAACCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGAATCATTCTTTGTAATGTTCTTAACAAGGTTCAACCTGGTGCTGTATCCAAGGTTGTGGAGAGTCCTGTTGATTCTGGACTAATTCCCGATGGAGCGCCGTTATCGGCCTTTCAGTATTTTGAAAATGTTAGGAATTTTCTGGTGGCTGTTCAGGAAATTGGAATTCCTACCTTTGAAGCATCTGATCTGGAACAAgGAGGAAAATCGTCGAGGATTGTGAACAGTGTCTTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGGGCTAATGGTGTGTGGAAATTTAGTGGAACTATCAAACCTGCAATCAGTACAAAATCTTTTGTAAGAAAAAACTCGGAGCCATTTACCAATTCGTTGTCAAGAACCTCTTCAATCAacgaaaaaaatgaaaaatctatGACTGCTTTTGCCTCTGATGTTGAGTCTAATAAAATGTCTAGTTCTCATTCTTTAGGTATGCTTGTTCGTGCAATACTATTCGATAAGAAGCCAGAAGAAGTTCCAACGTTGGTTGAATCTGTTTTGACTAAAGTCGTGGAGGAGTTCGAGCATCGCATTGCAAGCCAGGATGAACAGGAGTTAAAGCTTACAGTTCAAACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAGTTTCATGAGGAGTTCTCCAATTTAGGCATGCACATTCATGGTTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGGAGTATTAGGGTGTACTGTCGAGTAAGACCTTTCTTATCTGGACAATCAAATCATTTGAGTACTGTAGAGAACATAGAAGATGGAGTTATCACAATTAATGTTCCGTCAAAGAATGGGAaagggcgcaaatccttcaaCTTCAACAAAGTCTTTGGACCATCTGCAGCTCAAGGGGAAGTCTTCGCTGATATGCAGCCGCTCGTTAGGTCTGTTCTTGATGGTTTTAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATAACAGAAAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATCTGTTTTATACAGCGAATCAAAGAAAGGACACTTTTCGCTATGATGTGTCTGTTCAGATGATTGAAATTTATAATGAGCAAGTCAGAGATCTATTGGTTACAGATGGAACAACCAAAAGGTTAGAAATTCGTAGTAACTCTCAAAGAGGGCTCAGTGTACCAGATGCAAGCCTTGTCCAAGTATCATCAACAAATGATGTTATTGAACTAATGAACTTGGGCCATAAGAACCGTGCAGTCGGAGCGACAGCCCTTAATGACCGTAGTAGCCGATCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAGCTGTCCTACGAGGATGCATGCATCTCGTTGACTTGGCAGGAAGTGAGAGGGTTGACAAATCTGAGGCGACAGGTGATAGACTGAAAGAGGCACAGCACATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATAGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTACAGAAATAGCAAACTAACACAATTacttcaagattcacttgGAGGACAAGCGAAGACACTAATGTTTGTTCACATTAGTCCAGAGACTAATGCTATTGGAGAAACAATTAGCACACTAAAATTTGCAGAAAGAGTTGCGACAGTTGAACTTGGCGCTGCTCGAGTAAACAAGGACGGAGCAGATGTCAAAGAGCTCAAAGATCAGATTGCTAGCCTTAAGGCGCAATTGGCAAGAAAGGAAGGAAATTCAGAACATTCTATATCTGGGAGCTCTGGAAAATATAGGACAGCGGCTAGTGAACTATCACCCTATCATGCAAGCCAGCGGGCTGCAGATATCGTGGATGGTCCCTTTGGGTTCCGGCAACCAATGTTTGATGTTGGCAACTTAGAGCTTCAGAGCAATACTACATTGAGGCAAAAAACTCAGAGCATTGATTTTGATGAGATATTAACAAATTCACCACGGTGGCCCCCAGTGAATGGTCTTGTTCAAAACTGTgcagaagatgatgatgataaagaAACCGGTACAGGAGAGTGGGTTGATAAGGTCATGGTAAACAAGCTAGATGTGAACAAAACCGGTAACATGTTAGGGCATTGGGAATCAGATAATGGGAATTTATCCGAGGAATTTTATCAGAAATATCTCCAAGATTCTTCCAAAGTATACTCAGAACGATCTTACAATATGTTCATGAGAGGTAACCAGTTTAACATTGCTGGTTCAGATGACACCGATGATGTTGATGCTGCAACGAGTGATTCCTCAGAACATGACTTGCTTTGGCAATTTAATCATTCCAAAGTTACAAGCATAGCCAATGGAAATGAATCAAAGGGTAGGAAACTTGTCTCAAAGTCAGCAAAAAGCCCAGCAGCATTGAGCAAGAATGGTATTCATTCGTCTACTGCTCCTTCACCTTCACGGAAACAAATGAACGGTGTCTCACATCGAACACCAACAAGACAACCAGTTCCTGTTGACATGAAACGTAAAACTGGGAGTAGAAAGTGA 2841 0.402 MAALSFSVASVVQDVLQQHGTRLKDLDLESRKSEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVSKVVESPVDSGLIPDGAPLSAFQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNSVLALKSYSEWKQTGANGVWKFSGTIKPAISTKSFVRKNSEPFTNSLSRTSSINEKNEKSMTAFASDVESNKMSSSHSLGMLVRAILFDKKPEEVPTLVESVLTKVVEEFEHRIASQDEQELKLTVQTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFLSGQSNHLSTVENIEDGVITINVPSKNGKGRKSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTTKRLEIRSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPETNAIGETISTLKFAERVATVELGAARVNKDGADVKELKDQIASLKAQLARKEGNSEHSISGSSGKYRTAASELSPYHASQRAADIVDGPFGFRQPMFDVGNLELQSNTTLRQKTQSIDFDEILTNSPRWPPVNGLVQNCAEDDDDKETGTGEWVDKVMVNKLDVNKTGNMLGHWESDNGNLSEEFYQKYLQDSSKVYSERSYNMFMRGNQFNIAGSDDTDDVDAATSDSSEHDLLWQFNHSKVTSIANGNESKGRKLVSKSAKSPAALSKNGIHSSTAPSPSRKQMNGVSHRTPTRQPVPVDMKRKTGSRK 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03774 946 Gene3D Kinesin motor domain 325 696 IPR036961 -
Tsu01g03774 946 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Tsu01g03774 946 SMART kinesin_4 328 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03774 946 MobiDBLite consensus disorder prediction 899 929 - -
Tsu01g03774 946 SMART ch_5 39 157 IPR001715 GO:0005515
Tsu01g03774 946 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 267 943 - -
Tsu01g03774 946 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 268 - -
Tsu01g03774 946 SUPERFAMILY Calponin-homology domain, CH-domain 40 170 IPR036872 -
Tsu01g03774 946 MobiDBLite consensus disorder prediction 882 946 - -
Tsu01g03774 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 330 687 IPR027417 -
Tsu01g03774 946 CDD KISc_C_terminal 328 657 - -
Tsu01g03774 946 PANTHER KINESIN-LIKE PROTEIN KLP-3 267 943 - -
Tsu01g03774 946 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 268 - -
Tsu01g03774 946 PRINTS Kinesin heavy chain signature 605 626 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03774 946 PRINTS Kinesin heavy chain signature 403 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03774 946 PRINTS Kinesin heavy chain signature 525 542 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03774 946 PRINTS Kinesin heavy chain signature 556 574 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03774 946 Coils Coil 662 689 - -
Tsu01g03774 946 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Tsu01g03774 946 Pfam Kinesin motor domain 336 654 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g03774 946 Gene3D - 24 183 IPR036872 -
Tsu01g03774 946 ProSiteProfiles Kinesin motor domain profile. 330 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03774 Tsu-Chr1 45468536 45475067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03774 318 655 Calmodulin-binding Proteins AT5G65930 43.314 1.80e-79 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03774 K10406 - gmx:100801279 1448.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03774 01 45468536 45475067 Tsu01g03774 01 45468536 45475067 ECH
Tsu07g04258 07 48055374 48069699 Tsu01g03774 01 45468536 45475067 PCT